Skip to main content

Table 2 Number of genes involved in chitin, cellulose and protein degradation of D. stenobrocha and selected fungi

From: Drechslerella stenobrocha genome illustrates the mechanism of constricting rings and the origin of nematode predation in fungi

 

Chitinase

Cellulose degradation

 

Protein degradation

Protein families

GH18

GH5

GH6

GH7

GH74

GH61

CBM1

A01

S08

D. stenobrocha a

8

15

1

4

3

12

36

19

17

A. oligospora

15

21

2

6

4

26

84

30

42

M. acridum

19

9

0

0

1

1

2

24

31

M. anisopliae

27

9

0

0

1

2

4

32

45

T. melanosporum

5

7

0

0

1

3

3

3

6

A. nidulans

17

16

2

3

3

9

6

10

2

N. crassa

12

6

3

5

2

16

21

18

6

M. oryzae

15

13

3

6

2

23

19

20

24

V. albo-atrum

13

13

4

6

4

21

22

16

20

F. graminearum

18

14

1

2

2

14

12

18

26

  1. The annotation is based on CAZy classification (http://www.cazy.org) and MEROPS database (http://merops.sanger.ac.uk). The subfamilies are listed by the functions it involved in.
  2. aAbbreviation for the fungal genera: Drechslerella stenobrocha, Arthrobotrys oligospora, Metarhizium acridum, Metarhizium anisopliae, Tuber melanosporum, Aspergillus nidulans, Neurospora crassa, Magnaporthe oryzae, Verticillium albo-atrum, Fusarium graminearum.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us