Table 1 Overview of the obtained RNA-Seq data from the Trinity de novo assembly program in tall fescue leaves induced by heat stress
Assembly statistic (Contig) | Accession name | Total Length (bp) | Sequence No. | Max Length (bp) | Ave Length (bp) | N50 | >N50 Reads No. | GC% | Â |
|---|---|---|---|---|---|---|---|---|---|
PI 578718 | 143,998,502 | 241,537 | 17,976 | 596.18 | 821 | 42,413 | 47.36 | Â | |
PI 234881 | 149,482,961 | 253,100 | 17,633 | 590.61 | 806 | 44,521 | 47.41 | Â | |
Assembly statistic (Transcript) | Â | Total Length (bp) | Locus No. | Max Length (bp) | Ave Length (bp) | N50 | >N50 Reads No. | GC% | Transcript No. |
PI 578718 | 589,844,441 | 136,887 | 15,993 | 1,218 | 1,952 | 99,013 | 47.04 | 484,390 | |
PI 234881 | 575,842,899 | 150,053 | 17,029 | 1,192 | 1,950 | 94,941 | 47.15 | 483,175 | |
Unigene | Â | Total Length (bp) | Unigene No. | Max Length (bp) | Ave Length (bp) | N50 | >N50 Reads No. | GC% | Â |
| Â | 58,517,851 | 31,803 | 17,029 | 1,840 | 2,584 | 7,682 | 49.28 | Â |