Table 1 RRM families in Pfam database
From: Sequence search and analysis of gene products containing RNA recognition motifs in the human genome
Pfam ID | Pfam name | Description | Number of Pfam seed sequences |
|---|---|---|---|
PF00076 | RRM_1 | Clan RRM, has splicing factor and GO annotation as nucleic acid binding. Well-characterised | 79 |
PF04059 | RRM_2 | Clan RRM, Meiosis protein mei2 | 4* (310) |
PF08777 | RRM_3 | Clan RRM, La protein (RNA chaperone), 5 stranded Beta sheet (atypical RRM) | 15* (185) |
PF10598 | RRM_4 | PrP8 protein (Large RNA protein complex of spliceosome) | 25* (233) |
PF13893 | RRM_5 | Clan RRM, hnRNP | 107 |
PF14259 | RRM_6 | Clan RRM | 79 |
PF10378 | RRM | Found only in fungi, putative RNA binding domain | 7* (74) |