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Table 1 Microarray data of genes involved in miRNA and siRNA biogenesis in WT, pap2 , OE7 and OE21

From: Global small RNA analysis in fast-growing Arabidopsis thaliana with elevated concentrations of ATP and sugars

Gene WT pap2 OE7 OE21 OE7 FC OE21 FC P OE7 P OE21 Primary gene symbol
AT1G48410 9057 9424 10052 10717 111% 119% 0.322 0.057 Argonaute 1 (AGO1)
AT2G27880 225 218 415 354 183% 154% 0.037 0.048 Argonaute 5 (AGO5)*
AT1G69440 1073 853 2149 2357 200% 219% 0.002 0.000 Argonaute 7 (AGO7)*
AT5G44200 3599 3013 4053 4057 113% 113% 0.234 0.299 CPB20
AT2G13540 6824 6887 6310 6274 92% 92% 0.415 0.440 CPB80
AT1G01040 1543 1308 2319 2501 150% 162% 0.016 0.006 Dicer-like 1 (DCL1)*
AT3G43920 2701 2633 1984 2042 74% 75% 0.046 0.029 Dicer-like 3 (DCL3)*
AT4G20910 1308 1257 1139 1403 87% 107% 0.364 0.619 HEN1
AT1G09700 2576 2610 3368 3881 130% 150% 0.049 0.005 Hyponastic leaves 1 (HYL1)*
AT1G14790 1673 1576 2528 2874 149% 170% 0.052 0.009 RNA-dependent rna polymerase 1 (RDR1)*
AT5G23570 2079 2333 5530 6674 265% 322% 0.011 0.000 Suppressor of gene silencing 3 (SGS3)*
AT3G50100 1588 1368 446 647 28% 41% 0.004 0.000 Small RNA degrading nuclease 1 (SDN1)*
  1. *Significantly (pā€‰<ā€‰0.05) changed in both OE lines. FC: Fold change.
  2. The following genes were not significantly (pā€‰>ā€‰0.05) different between the WT and OE lines:
  3. AGO2, AGO4, AGO6, DCL2, DCL4, HEN 1, HEN2, HEN4, HASTY, NRPD1A, RDR2, RDR6 (SGS2), SDE3 and SDE5.