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Table 1 The defense-related genes annotated within the fine mapped region flanked by the markers sN8591 and A3-020 in the Brassicae rapa linkage group A03 and their associated gene ontology (GO) terms

From: Fine mapping of Rcr1 and analyses of its effect on transcriptome patterns during infection by Plasmodiophora brassicae

Seq. ID Seq. description GO term
Bra019401 ccr4-associated factor 1b P: Intracellular signal transduction; F: Ribonuclease activity; P: Ethylene biosynthetic process; P: RNA modification; P: Abscisic acid mediated signaling pathway; C: nucleus; P: Ethylene mediated signaling pathway; F: Nucleic acid binding; P: Defense response, incompatible interaction; P: MAPK cascade; P: Respiratory burst involved in defense response; P: defense response to bacterium; C: Intracellular; P: Nuclear-transcribed mRNA poly(A) tail shortening; P: Vegetative to reproductive phase transition of meristem; P: Response to chitin; F: 3′-5′ exonuclease activity; P: Response to biotic stimulus; P: Response to wounding
Bra019407 autophagy-related protein 8a F: Receptor activity; F: Microtubule binding; P: Para-aminobenzoic acid metabolic process; C: Autophagic vacuole; F: APG8-specific protease activity; P: Defense response to fungus; P: Heat acclimation; F: APG8 activating enzyme activity; C: Vacuolar lumen; F: Atg8 ligase activity; P: Autophagy
Bra019409 tir-nbs-lrr class resistance protein P: Defense response to bacterium; F: Adenyl ribonucleotide binding
Bra019410 disease resistance protein P: Defense response to bacterium; F: Nucleotide binding
Bra019412 tir-nbs-lrr class resistance protein F: Nucleoside-triphosphatase activity; P: Defense response; F: ADP binding; P: Signal transduction; C: Intracellular
Bra019413 tir-nbs-lrr class resistance protein C: Golgi membrane; C: Endoplasmic reticulum membrane; F: Binding; P: Defense response to fungus, incompatible interaction; C: Plasma membrane; P: Response to oomycetes
Bra038776 cysteine-rich receptor-like protein kinase 29 C: Vacuole; P: Response to chitin; C: Plasma membrane; P: Respiratory burst involved in defense response; P: Protein phosphorylation; F: ATP binding; P: Response to abscisic acid stimulus; F: Protein serine/threonine kinase activity