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Table 5 P-values of the Hotelling’s t-test comparing the prediction reliabilities r GEBV 2 obtained with the individual SNPs and Haploblocks approaches using Bayesian mixture model

From: Genomic prediction of genetic merit using LD-based haplotypes in the Nordic Holstein population

   Haploblocks and   
   non-blocked SNPs   Haploblocks only
D   Prot. Fert. Mast.   Prot. Fert. Mast.
0.25   0.002 0.193 0.292   0.000 0.279 0.270
0.35   0.006 0.076 0.355   0.000 0.028 0.236
0.45   0.010 0.054 0.144   0.003 0.007 0.402
0.55   0.008 0.045 0.585   0.000 0.082 0.711
0.65   0.004 0.081 0.652   0.001 0.086 0.961
0.75   0.052 0.009 0.236   0.048 0.022 0.163