Skip to main content

Table 1 Cell line specific expressed and repressed RTSSs and their association with genomic regions

From: Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines

  

Total

Annotated

Proximal

Intragenic

Intergenic

K562

Expressed

41 472

6 793

18 134

15 090

8 248

Repressed

122 575

3 678

17 105

64 677

40 793

GM12878

Expressed

54 475

7 151

19 998

22 949

11 528

Repressed

101 964

3 084

14 395

52 675

34 894

HeLaS3

Expressed

50 324

7 055

19 892

20 429

10 003

Repressed

107 756

3 311

14 831

55 866

37 059

HepG2

Expressed

52 862

7 311

21 005

22 305

9 552

Repressed

105 793

2 973

13 623

54 193

37 977