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Table 4 Significant functional categories under control conditions

From: Transcriptomic and proteomic analyses of a pale-green durum wheat mutant shows variations in photosystem components and metabolic deficiencies under drought stress

Regulation

Functional categories

Number of genes

P-value

Induced

01.05C-compound and carbohydrate metabolism

4

3.81E-03

 

01.05.03 polysaccharide metabolism

3

1.21E-04

 

01.05.03.03 chitin metabolism

2

1.48E-05

 

01.05.03.03.07 chitin catabolism

2

1.48E-05

 

32 CELL RESCUE, DEFENSE AND VIRULENCE

4

2.25E-03

 

36 SYSTEMIC INTERACTION WITH THE ENVIRONMENT

3

3.46E-03

 

36.20 plant/fungal specific systemic sensing and response

3

2.69E-03

 

36.20.16 plant defense response

3

1.73E-05

 

36.20.16.03 jasmonic acid/ethylene dependent systemic resistance

2

4.88E-05

 

36.20.16.05 systemic acquired resistance

2

9.10E-05

Repressed

01.03.16.03 DNA degradation

1

3.37E-03

 

32. CELL RESCUE, DEFENSE AND VIRULENCE

4

2.25E-03

 

32.01 stress response

4

2.99E-04

 

34. INTERACTION WITH THE ENVIRONMENT

4

3.86E-03

 

34.11 cellular sensing and response to external stimulus

4

2.65E-03

 

34.11.03 chemoperception and response

4

3.12E-04

 

34.11.03.12 water response

3

1.53E-05

 

36. SYSTEMIC INTERACTION WITH THE ENVIRONMENT

5

8.98E-06

 

36.20 plant/fungal specific systemic sensing and response

4

1.48E-04

 

36.20.18 plant hormonal regulation

4

7.93E-05

 

36.20.18.05 abscisic acid response

3

3.78E-05

  1. Significant functional categories represented in the induced and repressed probe sets in the mutant compared to wild-type plants at anthesis under control conditions according to the MIPS Functional Catalogue Database[122]. Only functional categories with a cut-off of P ≤ 0.005 were considered.