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Table 5 Modulated probe sets in the mutant compared to the wild-type at anthesis under control conditions

From: Transcriptomic and proteomic analyses of a pale-green durum wheat mutant shows variations in photosystem components and metabolic deficiencies under drought stress

Expression

Probe set

Gene annotation

Speciesa

UniProt

E-value

Fold change

qRT-PCR fold expression

      

(M vs WT)

 

Induced

TaAffx.128418.43.S1_at

Chitinase 3

1

Q8W427

1E-46

5.8

5

 

Ta.28.1.S1_at

Beta-1,3-glucanase

1

Q4JH28

1E-133

4.9

-

 

TaAffx.26815.1.S1_at

Blufensin1

2

B8X450

1E-13

4.4

3.4

 

Ta.169.1.S1_x_at

Germin-like protein (GLP2b)

1

Q9SM34

1E-154

4.3

2.8

 

Ta.20188.1.S1_a_at

Unknown

   

4

-

 

TaAffx.6092.1.S1_at

Naringenin,2-oxoglutarate 3-dioxygenase

3

B6SZR4

1E-126

3.6

3.5

 

Ta.3647.1.S1_at

Putative uncharacterized protein Sb01g018690

4

C5WXG4

6E-51

3.2

-

 

TaAffx.98744.1.S1_at

Putative uncharacterized protein Sb05g022350

4

C5Y4X4

3E-60

3.2

-

 

Ta.15159.1.S1_at

Pathogenesis-related protein precursor

2

P93181

3E-05

3.1

-

 

Ta.20188.1.S1_x_at

Unknown

   

3.1

-

 

TaAffx.24475.1.S1_x_at

Glucan endo-1,3-beta-glucosidase GII

2

P15737

9E-19

3.1

-

 

Ta.22572.1.S1_at

Unknown

   

2.7

-

 

Ta.8614.2.S1_x_at

WRKY45-like transcription factor

1

F8WPI8

2E-53

2.7

2.2

 

Ta.3830.1.S1_a_at

Unknown

   

2.6

-

 

Ta.30028.1.S1_s_at

Peroxidase 10 (POX10)

5

Q5I3E8

1E-66

2.4

 
 

Ta.3830.2.S1_x_at

Unknown

   

2.3

-

 

TaAffx.119315.2.S1_x_at

Beta-glucanase

2

Q7M1K2

5E-72

2.2

-

 

Ta.2278.3.S1_x_at

Chitinase II (CHT2)

1

Q9XEN3

3E-74

2.2

-

 

Ta.3830.3.S1_x_at

Unknown

   

2.1

-

 

TaAffx.24475.1.S1_at

Glucan endo-1,3-beta-glucosidase GII

2

P15737

9E-19

2.1

-

 

Ta.16980.1.S1_at

Peroxidase 10 (POX10)

5

Q5I3E8

5E-10

2.1

-

 

Ta.16599.1.S1_x_at

Adhesive/proline-rich protein

3

B4FH66

8E-29

2.1

-

 

Ta.8228.1.S1_at

Agmatine coumaroyl transferase-1(ACT-1)

2

A9ZPJ6

0

2

2.5

Repressed

Ta.2638.1.S1_at

RAB protein

1

Q41579

1E-175

-3.9

0.08

 

Ta.13255.1.S1_at

Dehydrin (WZY1-1)

1

Q8W192

6E-93

-3.9

0.3

 

Ta.23797.1.S1_x_at

Late embryogenesis abundant protein (LEA1)

1

Q8GV49

1E-104

-3.6

-

 

Ta.24453.1.S1_s_at

Oxalate oxidase (Germin protein)

1

Q9LD27

7E-39

-3.3

-

 

TaAffx.98394.1.S1_at

Q-type C2H2 zinc finger protein (ZFP23)

1

B0ZYY9

1E-97

-3.3

0.7

 

Ta.10390.1.S1_at

Papain-like cysteine proteinase (PAP-14)

2

B4ESF2

0

-2.9

-

 

Ta.5497.1.A1_at

Endonuclease

2

O81958

3E-13

-2.8

-

 

Ta.6015.1.S1_at

TdS40 protein (Fragment), putative

6

C4WYH7

5E-83

-2.7

-

 

TaAffx.83636.1.S1_at

Unknown

   

-2.7

-

 

Ta.4110.1.S1_at

Indole-3-acetic acid-amido synthetase (GH3.2), probable

7

P0C0M2

1E-124

-2.4

-

 

Ta.5879.1.S1_at

Peptide chain release factor subunit 1 (ERF1), putative

7

Q75K79

2E-92

-2.4

-

 

Ta.13682.1.A1_at

Progesterone 5-beta-reductase, putative

7

Q60DC5

1E-35

-2.3

-

 

Ta.7543.1.S1_at

Unknown

   

-2.2

-

 

Ta.5497.1.A1_x_at

Endonuclease

2

O81958

3E-13

-2.1

-

 

Ta.12477.1.S1_at

Homeobox-leucine zipper protein (ATHB-6)

3

B6U539

3E-03

-2.1

-

  1. aSpecies: 1: Triticum aestivum, 2: Hordeum vulgare, 3: Zea mays, 4: Sorghum vulgare, 5: Triticum monococcum, 6: Triticum turgidum ssp. Durum, 7: Oryza sativa.
  2. -: not determined.