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Table 5 Genes possibly acquired through gene flow by C. coli 76339

From: Comparative genomics of unintrogressed Campylobacter coli clades 2 and 3

Locus tag

RAST annotation

Present in

Missing in

BN865_01630

Methyl-accepting chemotaxis signal transduction protein

C1a; C1b

C1c; C2

BN865_02140

Methyl-accepting chemotaxis signal transduction protein

C1a; C2

C1b; C1c

BN865_02630c

Methyl-accepting chemotaxis signal transduction protein

C1a

C1b; C1c; C2

BN865_02680c

McrBC restriction endonuclease system, McrB subunit, putative

C2

C1a; C1b; C1c

BN865_03910

Conserved hypothetical secreted protein

C2

C1a; C1b; C1c

BN865_04310c

FIG 00470070: hypothetical protein

C1a

C1b; C1c; C2

BN865_05840c

Methyl-accepting chemotaxis signal transduction protein, fragment

C1a

C1b; C1c; C2

BN865_05850c

Methyl-accepting chemotaxis signal transduction protein, fragment

C1a

C1b; C1c; C2

BN865_06160

Hypothetical protein

C1a; C2

C1b; C1c

BN865_06170

Hypothetical protein

C1a; C2

C1b; C1c

BN865_06850c

Beta-1,3-glucosyltransferase

C1a; C2

C1b; C1c

BN865_07080

Hypothetical protein

C1a

C1b; C1c; C2

BN865_07090

2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)

C1a

C1b; C1c; C2

BN865_07100

D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

C1a

C1b; C1c; C2

BN865_07110

NAD-dependent epimerase/dehydratase

C1a

C1b; C1c; C2

BN865_07120

Putative cyclase superfamily

C1a

C1b; C1c; C2

BN865_07130

Conserved hypothetical protein 22

C1a

C1b; C1c; C2

BN865_07140

Hydrolase, haloacid dehalogenase-like family

C1a

C1b; C1c; C2

BN865_07150

CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase (EC 2.4.99.-)

C1a

C1b; C1c; C2

BN865_07160

FIG 00470714: hypothetical protein

C1a

C1b; C1c; C2

BN865_07180

Haloacid dehalogenase-like hydrolase domain/phosphoribulokinase domain protein

C1a

C1b; C1c; C2

BN865_07190

Capsular polysaccharide biosynthesis protein, putative

C1a

C1b; C1c; C2

BN865_07200

Capsular polysaccharide biosynthesis protein, putative

C1a

C1b; C1c; C2

BN865_08140c

Methionyl-tRNA formyltransferase (EC 2.1.2.9)

C1a

C1b; C1c; C2

BN865_10680c

Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-)/Dihydropteridine reductase (EC 1.5.1.34)

C1a; C1b; C1c; C2

-

BN865_10830

Hypothetical protein

C2

C1a; C1b; C1c

BN865_14240

Possible sugar transferase

C1a

C1b; C1c; C2

BN865_14270

Methyltransferase (EC 2.1.1.-), possibly involved in O-methyl phosphoramidate capsule modification

C1a; C1b

C1c; C2

BN865_14740

Family of unknown function (DUF450) family

C1a

C1b; C1c; C2

  1. The genes listed here were absent in other clade 3 strains, but present in C. coli clades 1 or 2.