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Table 5 Genes possibly acquired through gene flow by C. coli 76339

From: Comparative genomics of unintrogressed Campylobacter coli clades 2 and 3

Locus tag RAST annotation Present in Missing in
BN865_01630 Methyl-accepting chemotaxis signal transduction protein C1a; C1b C1c; C2
BN865_02140 Methyl-accepting chemotaxis signal transduction protein C1a; C2 C1b; C1c
BN865_02630c Methyl-accepting chemotaxis signal transduction protein C1a C1b; C1c; C2
BN865_02680c McrBC restriction endonuclease system, McrB subunit, putative C2 C1a; C1b; C1c
BN865_03910 Conserved hypothetical secreted protein C2 C1a; C1b; C1c
BN865_04310c FIG 00470070: hypothetical protein C1a C1b; C1c; C2
BN865_05840c Methyl-accepting chemotaxis signal transduction protein, fragment C1a C1b; C1c; C2
BN865_05850c Methyl-accepting chemotaxis signal transduction protein, fragment C1a C1b; C1c; C2
BN865_06160 Hypothetical protein C1a; C2 C1b; C1c
BN865_06170 Hypothetical protein C1a; C2 C1b; C1c
BN865_06850c Beta-1,3-glucosyltransferase C1a; C2 C1b; C1c
BN865_07080 Hypothetical protein C1a C1b; C1c; C2
BN865_07090 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) C1a C1b; C1c; C2
BN865_07100 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) C1a C1b; C1c; C2
BN865_07110 NAD-dependent epimerase/dehydratase C1a C1b; C1c; C2
BN865_07120 Putative cyclase superfamily C1a C1b; C1c; C2
BN865_07130 Conserved hypothetical protein 22 C1a C1b; C1c; C2
BN865_07140 Hydrolase, haloacid dehalogenase-like family C1a C1b; C1c; C2
BN865_07150 CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase (EC 2.4.99.-) C1a C1b; C1c; C2
BN865_07160 FIG 00470714: hypothetical protein C1a C1b; C1c; C2
BN865_07180 Haloacid dehalogenase-like hydrolase domain/phosphoribulokinase domain protein C1a C1b; C1c; C2
BN865_07190 Capsular polysaccharide biosynthesis protein, putative C1a C1b; C1c; C2
BN865_07200 Capsular polysaccharide biosynthesis protein, putative C1a C1b; C1c; C2
BN865_08140c Methionyl-tRNA formyltransferase (EC 2.1.2.9) C1a C1b; C1c; C2
BN865_10680c Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-)/Dihydropteridine reductase (EC 1.5.1.34) C1a; C1b; C1c; C2 -
BN865_10830 Hypothetical protein C2 C1a; C1b; C1c
BN865_14240 Possible sugar transferase C1a C1b; C1c; C2
BN865_14270 Methyltransferase (EC 2.1.1.-), possibly involved in O-methyl phosphoramidate capsule modification C1a; C1b C1c; C2
BN865_14740 Family of unknown function (DUF450) family C1a C1b; C1c; C2
  1. The genes listed here were absent in other clade 3 strains, but present in C. coli clades 1 or 2.