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Table 4 Deletion statistics

From: Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations

  

Deletions

   
 

Feature

RSV

SM

  

Variants

Genes

Variants

Genes

Total

Intergenic

43,385

9,909

41,604

9459

 

Intronic

2326

1384

2317

1354

 

UTR

141

110

147

115

 

CDS

581

472

493

404

Length < 6

Intergenic

34,567

8103

32,974

7696

 

Intronic

1898

1190

1914

1162

 

UTR

114

88

114

87

 

CDS

369

296

331

257

Length > 100

Intergenic

2365

950

2337

920

 

Intronic

80

77

80

78

 

UTR

6

6

7

7

 

CDS

48

48

37

37

  1. Statistics of the number of deletions and the number of corresponding annotated gene.