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Figure 6 | BMC Genomics

Figure 6

From: Transcriptome sequencing of Atlantic salmon (Salmo salar L.) notochord prior to development of the vertebrae provides clues to regulation of positional fate, chordoblast lineage and mineralisation

Figure 6

Clustered heatmap of chondrogenic factors expressed in the notochord. Gene networks that possibly direct chondrogenic differentiation pathway from mesenchyme stem cells were expressed in the notochord RNA-seq dataset. Genes were filtered with a threshold of blast score > 300 and represented by genes with highest blast score if they had the same gene symbol. Gene expression from RNA-seq from three spatial segments were summed and represented as sumT1, sumT2 and sumT3 (T1:510 ± 20 d°, T2: 610 ± 20 d°, T3: 710 ± 20 d°) and plotted as fold change to the average among the summed libraries. Genes were clustered according to their expression pattern.

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BMC Genomics

ISSN: 1471-2164

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