Skip to main content

Table 1 Analysis of small RNA sequences from the flower buds of A line and B line of Brassica campestris

From: Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensi s by high-throughput sequencing and degradome analysis

Category Flower buds of A line Flower buds of B line
Sequences Unique sequences Sequences Unique sequences
Raw reads 6998586 2093851 6792888 2463600
Number of reads removed because 3ADT was not found 507331 / 212884 /
Number of reads removed because of <15 bases 1365432 / 1237678 /
Junk reads 27276 / 33207 /
RFam 541924 56567 611768 76694
Repbase 35231 8193 73970 13031
Mappable sequences 4540620 1696791 4667617 2075669