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Table 1 Read counts

From: Improving transcriptome construction in non-model organisms: integrating manual and automated gene definition in Emiliania huxleyi

Sample Total reads (cleaned*) Reads aligned to Emihu1plus** Reads mapped to transcripts
2BE 79,031,642 51,787,959 (66%) 65,282,968 (83%)
4BE 70,232,202 44,631,230 (64%) 57,466,155 (82%)
6BE 71,097,330 44,755,528 (63%) 57,685,982 (81%)
8BE 84,292,692 50,341,359 (60%) 64,839,232 (77%)
10BE 30,393,401 3,559,270 (12%) 6,042,025 (20%)
12BE 74,680,032 44,832,848 (60%) 58,182,177 (78%)
  1. *After removing adaptors and trimming to 90 bp (removed 15million reads in 10BE and up to 5 million in the other samples) **Each sequence was counted once even if several reads have the same sequence, each sequence aligned to the genome ~2-2.5 times in average (for 10BE, 4 times). Percentage of cleaned reads in parentheses.