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Table 3 QTLs identified through a multi-SNP regression model fitted with net root growth in nutrient solution without aluminum (NRG_c) data

From: Genetic dissection of Al tolerance QTLs in the maize genome by high density SNP scan

QTL Chr SNP_ID Position (Mbp) -log10( P) Effect R P 2(%) CI (Mbp)
qNRG_c1 1 S1_69700844 69.70 7.98 −15.97 25.06 67.25 - 71.15
qNRG_c3 3 S3_195644732 195.64 10.50 −18.97 32.18 187.71 - 195.96
qNRG_c6 6 S6_158261558 158.26 10.20 −18.46 31.35 156.99 - 158.45
R T 2 (%)       56.88  
  1. Chr: maize chromosome; SNP_ID indicate the chromosome and the physical position in bp.
  2. The position of each QTL was determined in Mbp (Mega base pairs) as the highest –log10 (P-value).
  3. R P 2(%) is the percentage of the phenotypic variance explained by each QTL and R T 2(%) is the percentage of the phenotypic variance explained by the full model, including all significant QTLs.
  4. CI is the 95% confidence interval of the QTL position.