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Table 1 List of mRNAs with increased polysome association during ER stress (treatment with DTT or TM)

From: Polysome profiling reveals broad translatome remodeling during endoplasmic reticulum (ER) stress in the pathogenic fungus Aspergillus fumigatus

DTT TM mRNA
Ribosomal proteins/translation   
2.81 2.92 60S ribosomal protein L27a (AFUA_3G05600)
2.15 3.20 40S ribosomal protein S29 (AFUA_6G12720)
2.87 2.26 40S ribosomal protein S8 (AFUA_6G07360)#
2.80 2.16 50S ribosomal protein L36 (AFUA_4G12810)
2.59 2.32 37S ribosomal protein S16 (AFUA_5G08350)
1.48 2.60 Mitochondrial ribosomal protein L11 (AFUA_5G11830)
2.01 1.93 Ribosome biogenesis protein (AFUA_8G04790)
1.18 2.49 37S ribosomal protein S5 (AFUA_5G11540)
1.51 1.93 40S ribosomal protein S9 (AFUA_3G06970)#
1.01 2.42 40S ribosomal protein Rps16 (AFUA_2G10500)#
1.07 2.20 60S ribosomal protein L6 (AFUA_6G09060)
4.51 2.08 Aconitate hydratase/Mitochondrial ribosomal protein subunit L49 (AFUA_3G08080)#
3.11 1.36 Eukaryotic translation initiation factor 3 subunit eIF-Ca (AFUA_1G05200)
1.72 2.49 Translation elongation factor eEF-1B gamma subunit, putative (AFUA_1G17120)
1.27 2.52 GTP binding protein Guf1 (AFUA_3G14350)
1.86 1.05 Eukaryotic translation initiation factor 3 subunit eIF-Ck (AFUA_3G09280)
Cell membrane/cell wall   
1.08 6.34 Squalene monooxygenase Erg1 (AFUA_5G07780)
1.61 1.43 Ergosterol biosynthesis protein Erg28 (AFUA_2G11550)
1.37 1.39 1,3-beta-glucanosyltransferase Gel2 (AFUA_6G11390)
3.51 4.88 Cell wall proline rich protein (AFUA_1G13450)
2.59 3.62 Actin cortical patch protein Sur7 (AFUA_2G02310)
4.21 2.23 CFEM domain protein (AFUA_6G14090)
1.36 1.89 GPI anchored protein (AFUA_2G07800)
1.78 1.01 GPI anchored dioxygenase (AFUA_3G01800)
1.24 3.13 Dolichol phosphate-mannose biosynthesis regulatory protein Dpm2 (AFUA_1G03020)
1.32 1.05 N-acetylglucosaminyl-phosphatidylinositol deacetylase, putative (AFUA_5G12550)
1.10 2.58 Integral membrane protein (Pth11) (AFUA_6G03600)#
Protein folding & modification   
1.29 2.48 Alpha-1,2-mannosyltransferase (Alg2) (AFUA_5G13210)
1.83 2.58 Disulfide isomerase (TigA) (AFUA_5G12260)#
1.04 2.84 Protein disulfide isomerase Pdi1 (AFUA_2G06150)
1.04 1.82 N-acetyltransferase family protein (AFUA_4G10930)
1.35 1.47 N-acetyltransferase complex ARD1 subunit (AFUA_1G09600)
2.11 2.89 Prefoldin subunit 5 (AFUA_1G10740)#
Endosome/protein transport and sorting   
1.71 1.94 Rho GTPase activator (Bem3) (AFUA_6G06400)
1.69 1.41 Fasciclin domain family protein (AFUA_1G14300)
3.75 1.50 Ras-like GTP-binding protein (AFUA_4G03100)
1.39 2.26 Endosomal cargo receptor (Erv14) (AFUA_6G07290)
1.58 2.16 Synaptobrevin-like protein Sybl1 (AFUA_6G11270)
1.57 3.04 RAB GTPase Vps21/Ypt51 (AFUA_3G10740)#
5.38 2.13 Vacuolar protein sorting 55 superfamily (AFUA_6G04780)#
1.03 2.77 AP-1 adaptor complex subunit sigma (AFUA_2G01570)
1.93 1.75 Mitochondrial import inner membrane translocase subunit (TIM22) (AFUA_5G02200)#
Transcription   
3.07 3.04 bZIP transcription factor JlbA/IDI-4 (AFUA_5G01650)#
1.88 3.90 CBF/NF-Y family transcription factor (AFUA_2G14250)
4.34 1.41 C6 transcription factor (AFUA_3G09130)
2.03 3.35 Transcription factor RfeF (AFUA_4G10200)
1.03 4.24 CP2 transcription factor (AFUA_1G17350)
3.09 1.71 bZIP transcription factor (LziP) (AFUA_1G16460)#
1.84 2.39 Transcription initiation factor TFIID, 31kd subunit, putative (AFUA_1G14600)
2.18 1.29 C6 transcription factor (AFUA_6G11230)
1.48 1.08 RNA polymerase II mediator complex component Srb8, putative (AFUA_3G06250)
1.63 3.90 CHCH domain protein (AFUA_3G06370)#
2.44 1.48 Nitrogen metabolite repression regulator NmrA (AFUA_5G02920)
Stress response   
1.24 1.99 General stress response phosphoprotein phosphatase Psr1/2 (AFUA_1G04790)#
4.37 3.43 Glutathione peroxidase Hyr1 (AFUA_3G12270)
  1. Values represent log2[translational efficiency ratio], as described in Methods. #Those mRNAs that were also subject to translational upregulation in the thermal stress dataset (37°C, 60 min).