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Table 1 Genome Comparisons of M. roreri and M. perniciosa

From: Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases

 

Genome size (bp)

Average (G + C)%

Total number contigs

N50 (bp)

Max contig size (bp)

Min contig size (bp)

Median contig size

Total tRNA

Avg gene Density

Total CDS

Avg (G + C) CDS%

Maximum CDS size (bp)

Median CDS size (bp)

M. roreri

52,334,075

46.88%

3,298

48,134

571,142

367

5,455

670*

0.42185#

17,920

49.55%

15,081

1,023

M. perniciosa

44,661,472

47.81%

3,087

48,096

476,325

500

3,300

550

0.51058#

17,008

49.83%

15,048

1,095

  1. *using tRNAscan default parameters yielded 331 contigs that have tRNA for a total of 670 tRNA’s.
  2. #CDS bases/total genome bases.