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Table 2 Number of SNPs assigned to linkage groups

From: Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing

Atlantic salmon linkage group Atlantic salmon chromosome Number of SNPs on linkage group (CRI-MAP) Final number of SNP markers ordered on each linkage group (Onemap)
Br5 mother Br6 mother Br5 father Br6 father
1 2 244 59 23 73 68
2 10 350 102 86 88 79
3 14 197 31 35 68 76
4 6 283 47 43 84 79
5 13 306 67 84 84 85
6 12 257 72 46 81 71
7 24 138 27 47 51 39
8 15 520 78 47 69 84
9 11 226 50 64 67 49
10 9 394 95 94 113 103
11 3 336 48 92 98 103
12 5 224 24 29 74 68
13 19 197 49 58 43 59
14 21 152 38 40 47 33
15 27 132 31 39 40 43
16 18 209 33 58 65 67
17 1 442 70 78 130 129
18 23 155 36 33 55 51
19 8 42 8 0 13 15
20 25 115 20 33 26 23
21 26 113 25 25 30 35
22 17 158 19 44 33 64
23 16 215 58 49 66 55
24 7 169 22 17 57 56
25 20 237 65 77 62 73
28 4 220 19 32 80 83
30 29 116 43 23 36 37
31 28 132 34 37 42 39
32 22 179 41 66 58 51
TOTAL - 6,458 1,311 1,402 1,833 1,817
  1. SNPs were assigned to a linkage group using previously mapped anchor markers in CRI-MAP. SNPs were then ordered on each linkage group in Onemap for each individual mapping parent separately.