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Table 3 Differential polymorphism analysis overview

From: Comparative analysis of response to selection with three insecticides in the dengue mosquito Aedes aegyptiusing mRNA sequencing

 

Perm-R

Imida-R

Propo-R

 

SNPs

%

SNPs

%

SNPs

%

Detected SNPs

143737

100

143645

100

133892

100

Differential SNPs

1315

0.9

811

0.6

812

0.6

Genic consequences*

1403

100

881

100

908

100

5′ UTR

32

2.3

28

3.2

25

2.8

Synonymous coding

715

51.0

442

50.2

453

49.9

Non-synonymous Coding

137

9.8

95

10.8

108

11.9

Intronic

66

4.7

45

5.1

54

5.9

3′ UTR

121

8.6

88

10.0

87

9.6

Intergenic

325

23.2

184

20.9

181

19.9

  1. *Consequences of allelic changes are only indicated for differential SNPs (i.e. alleles showing > 50% allelic frequency difference in any selected strain as compared to the susceptible strain). These consequences were computed based on genome annotation.
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BMC Genomics

ISSN: 1471-2164

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