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Table 3 Colo-829 tandem duplications identified by our method and PCR/Sanger -validated or previously reported (Hg 18) coordinates

From: DB2: a probabilistic approach for accurate detection of tandem duplication breakpoints using paired-end reads

Chromosome Reported*/Sequencing validated start Reported*/Sequencingvalidated end Predicted start Bp Predicted end Bp Previously reported?*
1 222713226 222866743 222713222 222866796 Yes
7 104272303 104399536 104272363 104399571 Yes
7 114317959 114318185 114317896 114318193 No
16 80356160 80356702 80356082 80356669 No
  1. *in the study that first sequenced this sample [27]. The two that were not previously reported are PCR (Figure 7) and Sanger Sequencing (Additional file 9: Figure S7) validated.