Figure 3
From: seqCNA: an R package for DNA copy number analysis in cancer using high-throughput sequencing
Copy number calling of HCC1143 sample’s segmented RC profile. Visualization of the GC corrected and segmented profiles of sample HCC1143, together with the thresholds that delimit copy number calls. Chromosomes are delimited by black vertical lines. The GC corrected profile is shown as a black-coded density map, the segmented profile is shown in green and the thresholds are marked in red.