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Table 6 KEGG (Kyoto encyclopedia of genes and genomes) pathways significantly enriched by target genes of 14 out of 17* differentially expressed miRNAs during E. coli or S. aureus challenge of MAC-T cells

From: Transcriptome microRNA profiling of bovine mammary epithelial cells challenged with Escherichia coli or Staphylococcus aureusbacteria reveals pathogen directed microRNA expression profiles

KEGG Pathways

miR-365-3p

miR-30b-5p/30c

Let-7a-5p

miR-23a

miR-148a

miR-24-3p

miR-92a

miR-193a-3p

miR-423-5p

miR-99b

miR-499

miR-486

miR-2339

Immune system

             

B cell receptor signaling pathway

X

X

           

T-cell receptor signaling

 

X

X

          

Fc gamma R-mediated, phagocytosis/chemokine signaling

X

  

X

         

Signal transduction

             

MAPK signaling pathway

X

X

 

X

 

X

X

X

X

    

ErbB signaling pathway

 

X

X

 

X

X

       

Wnt signaling pathway

X

X

 

X

X

X

 

X

     

TGF-beta signaling pathway

  

X

X

X

X

       

Calcium signaling pathway

     

X

X

 

X

    

Phosphatidylinositol pathway

   

X

  

X

      

ECM-receptor interaction

  

X

 

X

        

Cellular processes (transport and catabolism, cell motility, cell communication)

     

Endocytosis

 

X

 

X

 

X

       

Lysosome/apoptosis

X

 

X

          

Regulation of actin cytoskeleton

X

X

 

X

X

X

X

   

X

  

Cell cycle

X

 

X

 

X

 

X

      

P53 signaling pathway

  

X

X

X

      

X

 

Adherens/tight junction

   

X

        

X

Focal adhesion

 

X

X

X

X

X

       

Endocrine system

             

Insulin signaling pathway

  

X

     

X

    

Adipocytokine signaling pathway

  

X

 

X

        

GnRH signaling pathway

  

X

    

X

X

    

Melanogenesis

X

    

X

   

X

   

Nervous system

             

Long term potentiation

X

X

    

X

  

X

   

Neurotrophin signaling pathway

X

X

X

X

 

X

 

X

     

Development: Axon guidance

 

X

X

X

X

X

  

X

 

X

X

X

Metabolism: Glycerophospholipid metabolism/glycosphingolipid biosynthesis

  

X

    

X

    

Human diseases

             

Pathways in cancer

 

X

X

X

X

  

X

X

X

X

X

 

Colorectal cancer

X

X

X

X

 

X

 

X

 

X

X

  

Pancreatic cancer

X

 

X

X

X

        

Bladder cancer

  

X

          

Prostate cancer

X

X

X

X

X

      

X

 

Small cell lung cancer

X

 

X

        

X

 

Non-small cell lung cancer

X

X

X

 

X

        

Thyroid cancer

  

X

          

Renal cell carcinoma

X

  

X

X

  

X

     

Endometrical cancer

X

 

X

          

Glioma

X

X

X

 

X

      

X

 

Melanoma

X

 

X

 

X

      

X

 

Type II diabetes mellitus

 

X

X

          

Chronic myeloid leukemia

X

 

X

X

X

        

Acute myeloid leukemia

    

X

  

X

     
  1. *Results for miR-21-3p were ignored because only few target genes out of 78 were non-significantly enriched in two pathways (Neurotophin signaling pathway- 3 genes and Ubiquitin mediated pathway- 3 genes). Similarly, only 3 genes each out of 88 target genes for miR-184 were enriched (P > 0.05) in two pathways, Chronic myeloid leukemia and Prostate cancer and were ignored. The target genes for miR-un5, a newly identified miRNA in this study were not determined.