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Table 1 Summary Statistics for OSD analyses for six strain comparisons

From: Genomic structure of nucleotide diversity among Lyon rat models of metabolic syndrome

Comparison

PET

# Windows > PET

% Windows > PET

# divergent haplotype blocks

Average block length

SD block length

Average OSD first peak

Average OSD second peak

# SNPs in comparison

# SNPs in haplotype blocks

% SNPs in haplotype blocks

Lyon vs BN

LH/BN

4.50x10−4

18,242

67.07

1,431

1,431,996

1,506,679

5.44x10−5

1.69x10−3

3,127,650

3,078,898

98.44

LL/BN

4.52x10−4

17,989

66.14

1,396

1,287,865

1,565,760

5.10x10−5

1.69x10−3

3,094,251

3,047,301

98.48

LN/BN

4.57x10−4

17,982

66.11

1,398

1,285,500

1,493,916

5.05x10−5

1.69x10−3

3,082,757

3,036,234

98.49

Average

4.53x10−4

18,071

66.44

1,408

1,335,120

1,522,118

5.20x10−5

1.69x10−3

3,101,553

3,054,144

98.47

Lyon pairwise

LH/LN

3.69x10−4

4,202

15.45

477

880,419

960,896

5.28x10−6

1.50x10−3

643,234

630,814

98.07

LH/LL

3.84x10−4

4,041

14.86

485

828,584

851,988

5.68x10−6

1.56x10−3

643,233

630,878

98.08

LL/LN

3.44x10−4

3,510

12.90

360

968,953

1,048,667

3.74x10−6

1.49x10−3

532,429

531,904

99.90

Average

3.66x10−4

3,918

14.40

441

892,652

953,850

4.90x10−6

1.52x10−3

606,299

597,865

98.68