TY - CHAP AU - Bray, E. A. AU - Bailey-Serres, J. AU - Weretilnyk, E. ED - Gruissem, W. ED - Buchannan, B. ED - Jones, R. PY - 2000 DA - 2000// TI - Responses to abiotic stresses. Chapter 22 BT - Responses to Abiotic Stresses PB - American Society of Plant Physiologists CY - Rockville, MD ID - Bray2000 ER - TY - JOUR AU - Kreps, J. A. AU - Wu, Y. AU - Chang, H. -. S. AU - Zhu, T. AU - Wang, X. AU - Harper, J. F. PY - 2002 DA - 2002// TI - Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress JO - Plant Physiol VL - 130 UR - https://doi.org/10.1104/pp.008532 DO - 10.1104/pp.008532 ID - Kreps2002 ER - TY - JOUR AU - Cheng, C. AU - Yun, K. -. Y. AU - Ressom, H. W. AU - Mohanty, B. AU - Bajic, V. B. AU - Jia, Y. AU - Yun, S. J. AU - Reyes, B. G. D. PY - 2007 DA - 2007// TI - An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling- tolerant japonica rice JO - BMC Genomics VL - 8 UR - https://doi.org/10.1186/1471-2164-8-175 DO - 10.1186/1471-2164-8-175 ID - Cheng2007 ER - TY - JOUR AU - Christov, N. K. AU - Yoneyama, S. AU - Shimamoto, Y. AU - Imai, R. PY - 2007 DA - 2007// TI - Differential expression of wheat genes during cold acclimation JO - Cytol Genet VL - 41 UR - https://doi.org/10.3103/S0095452707030024 DO - 10.3103/S0095452707030024 ID - Christov2007 ER - TY - JOUR AU - Cao, P. X. AU - Song, J. AU - Zhou, C. J. AU - Weng, M. L. AU - Liu, J. AU - Wang, F. X. AU - Zhao, F. AU - Feng, D. Q. AU - Wang, B. PY - 2009 DA - 2009// TI - Characterization of multiple cold induced genes from Ammopiptanthus mongolicus and functional analyses of gene AmEBP1 JO - Plant Mol Biol VL - 69 UR - https://doi.org/10.1007/s11103-008-9434-1 DO - 10.1007/s11103-008-9434-1 ID - Cao2009 ER - TY - JOUR AU - Allen, G. J. AU - Chu, S. P. AU - Schumacher, K. AU - Shimazaki, C. T. AU - Vafeados, D. AU - Kemper, A. AU - Hawke, S. D. AU - Tallman, G. AU - Tsien, R. Y. AU - Harper, J. F. PY - 2000 DA - 2000// TI - Alteration of stimulus-specific guard cell calcium oscillations and stomatal closing in Arabidopsis det3 mutant JO - Science VL - 289 UR - https://doi.org/10.1126/science.289.5488.2338 DO - 10.1126/science.289.5488.2338 ID - Allen2000 ER - TY - JOUR AU - Seki, M. AU - Narusaka, M. AU - Abe, H. AU - Kasμga, M. AU - Yamaguchi-Shinozaki, K. AU - Carninci, P. AU - Hayashizaki, Y. AU - Shinozaki, K. PY - 2011 DA - 2011// TI - Monitoring the expression pattern of 1300 Arabidopsis genes under droμght and cold stresses by using a full-length cDNA microarray JO - Plant Cell VL - 13 ID - Seki2011 ER - TY - JOUR AU - Thomashow, M. F. PY - 1999 DA - 1999// TI - Freezing tolerance genes and regulatory mechanisms. Ann Rev Plant Physiol JO - Plant Mol Biol VL - 50 ID - Thomashow1999 ER - TY - JOUR AU - Fowler, S. AU - Thomashow, M. F. PY - 2002 DA - 2002// TI - Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway JO - Plant Cell VL - 14 UR - https://doi.org/10.1105/tpc.003483 DO - 10.1105/tpc.003483 ID - Fowler2002 ER - TY - JOUR AU - Zhang, G. AU - Guo, G. AU - Hu, X. AU - Zhang, Y. AU - Li, Q. AU - Li, R. AU - Zhuang, R. AU - Lu, Z. AU - He, Z. AU - Fang, X. AU - Chen, L. PY - 2010 DA - 2010// TI - Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome JO - Genome Res VL - 20 UR - https://doi.org/10.1101/gr.100677.109 DO - 10.1101/gr.100677.109 ID - Zhang2010 ER - TY - JOUR AU - Raherison, E. AU - Rigault, P. AU - Caron, S. AU - Poulin, P. AU - Boyle, B. AU - Verta, J. P. AU - Giguere, I. AU - Bomal, C. AU - Bohlmann, J. AU - MacKay, J. PY - 2012 DA - 2012// TI - Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expression JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-434 DO - 10.1186/1471-2164-13-434 ID - Raherison2012 ER - TY - JOUR AU - Qiu, Q. AU - Ma, T. AU - Hu, Q. AU - Liu, B. AU - Wu, Y. AU - Zhou, H. AU - Wang, Q. AU - Wang, J. AU - Liu, J. PY - 2011 DA - 2011// TI - Genome- scale transcriptome analysis of the desert poplar, Populus euphratica JO - Tree Physiol VL - 31 UR - https://doi.org/10.1093/treephys/tpr015 DO - 10.1093/treephys/tpr015 ID - Qiu2011 ER - TY - JOUR AU - Xu, D. L. AU - Long, H. AU - Liang, J. J. AU - Zhang, J. AU - Chen, X. AU - Li, J. L. AU - Pan, Z. F. AU - Deng, G. B. AU - Yu, M. Q. PY - 2012 DA - 2012// TI - De novo assembly and characterization of the root transcriptome of Aegilops variabilis during an interaction with the cereal cyst nematode JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-133 DO - 10.1186/1471-2164-13-133 ID - Xu2012 ER - TY - JOUR AU - Cong, H. Q. AU - Li, Z. Y. AU - Xu, L. PY - 2013 DA - 2013// TI - Characterizing developmental and inducible differentiation between juvenile and adult plants of Aechmea fasciata treated with ethylene by transcriptomic analysis JO - Plant Growth Regul VL - 69 UR - https://doi.org/10.1007/s10725-012-9767-2 DO - 10.1007/s10725-012-9767-2 ID - Cong2013 ER - TY - JOUR AU - Trick, M. AU - Long, Y. AU - Meng, J. AU - Bancroft, I. PY - 2009 DA - 2009// TI - Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing JO - Plant Biotechnol J VL - 7 UR - https://doi.org/10.1111/j.1467-7652.2008.00396.x DO - 10.1111/j.1467-7652.2008.00396.x ID - Trick2009 ER - TY - JOUR AU - Li, P. AU - Ponnala, L. AU - Gandotra, N. AU - Wang, L. AU - Si, Y. AU - Tausta, S. L. AU - Kebrom, T. H. AU - Provart, N. AU - Patel, R. AU - Myers, C. R. AU - Reidel, E. J. AU - Turgeon, R. AU - Liu, P. AU - Sun, Q. AU - Nelson, T. AU - Brutnell, T. P. PY - 2010 DA - 2010// TI - The developmental dynamics of the maize leaf transcriptome JO - Nat Genet VL - 42 UR - https://doi.org/10.1038/ng.703 DO - 10.1038/ng.703 ID - Li2010 ER - TY - JOUR AU - Zhang, J. AU - Liang, S. AU - Duan, J. AU - Wang, J. AU - Chen, S. AU - Cheng, Z. AU - Zhang, Q. AU - Liang, X. AU - Li, Y. PY - 2012 DA - 2012// TI - De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.) JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-90 DO - 10.1186/1471-2164-13-90 ID - Zhang2012 ER - TY - JOUR AU - Gahlan, P. AU - Singh, H. R. AU - Shankar, R. AU - Sharma, N. AU - Kumari, A. AU - Chawla, V. AU - Ahuja, P. S. AU - Kumar, S. PY - 2012 DA - 2012// TI - De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-126 DO - 10.1186/1471-2164-13-126 ID - Gahlan2012 ER - TY - JOUR AU - Pilar, M. AU - Gregogy, T. AU - Mccollum, M. P. PY - 2008 DA - 2008// TI - Transcriptome profiling of grapefruit flavedo following exposure to low temperature and conditioning treatments uncovers principal molecular components involved in chilling tolerance and susceptibility JO - Plant Cell Environ VL - 31 UR - https://doi.org/10.1111/j.1365-3040.2008.01793.x DO - 10.1111/j.1365-3040.2008.01793.x ID - Pilar2008 ER - TY - JOUR AU - Pang, T. AU - Ye, C. Y. AU - Xia, X. L. AU - Yin, W. L. PY - 2013 DA - 2013// TI - De novo sequencing and transcriptome analysis of the desert shrub, Ammopiptanthus mongolicus, during cold acclimation using IIIimina/Solexa JO - BMC Genomic VL - 14 UR - https://doi.org/10.1186/1471-2164-14-488 DO - 10.1186/1471-2164-14-488 ID - Pang2013 ER - TY - JOUR AU - Chen, J. H. AU - Song, Y. P. PY - 2013 DA - 2013// TI - Genome-Wide analysis of gene expression in response to droμght stress in Populus simomnii JO - Plant Mol Biol Rep VL - 31 UR - https://doi.org/10.1007/s11105-013-0563-6 DO - 10.1007/s11105-013-0563-6 ID - Chen2013 ER - TY - JOUR AU - Kawamura, Y. AU - Uemura, M. PY - 2003 DA - 2003// TI - Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation JO - Plant J VL - 36 UR - https://doi.org/10.1046/j.1365-313X.2003.01864.x DO - 10.1046/j.1365-313X.2003.01864.x ID - Kawamura2003 ER - TY - JOUR AU - Moellering, E. R. AU - Muthan, B. AU - Benning, C. PY - 2010 DA - 2010// TI - Freezing tolerance in plants requires lipid remodeling at the outer chloroplast membrane JO - Science VL - 330 UR - https://doi.org/10.1126/science.1191803 DO - 10.1126/science.1191803 ID - Moellering2010 ER - TY - JOUR AU - Degenkolbe, T. AU - Giavalisco, P. AU - Zuther, E. AU - Seiwert, B. AU - Hincha, D. K. AU - Willmitzer, L. PY - 2012 DA - 2012// TI - Differential remodeling of the lipidome during cold acclimation in natural accessions of Arabidopsis thaliana JO - Plant J VL - 32 UR - https://doi.org/10.1111/tpj.12007 DO - 10.1111/tpj.12007 ID - Degenkolbe2012 ER - TY - JOUR AU - Gibson, S. AU - Arondel, V. AU - Iba, K. AU - Somerville, C. PY - 1994 DA - 1994// TI - Cloning of a temperature-regulated gene encoding a chloroplast omega-3 desaturase from Arabidopsis thaliana JO - Plant Physiol VL - 106 UR - https://doi.org/10.1104/pp.106.4.1615 DO - 10.1104/pp.106.4.1615 ID - Gibson1994 ER - TY - JOUR AU - Gorsuch, P. A. AU - Pandey, S. AU - Atkin, O. K. PY - 2010 DA - 2010// TI - Temporal heterogeneity of cold acclimation phenotypes in Arabidopsis leaves JO - Plant Cell Environ VL - 33 UR - https://doi.org/10.1111/j.1365-3040.2009.02074.x DO - 10.1111/j.1365-3040.2009.02074.x ID - Gorsuch2010 ER - TY - JOUR AU - Ashraf, M. AU - Foolad, M. R. PY - 2007 DA - 2007// TI - Roles of glycine betaine and proline in improving plant abiotic stress resistance JO - Environ Exp Bot VL - 59 UR - https://doi.org/10.1016/j.envexpbot.2005.12.006 DO - 10.1016/j.envexpbot.2005.12.006 ID - Ashraf2007 ER - TY - JOUR AU - Verbrμggen, N. AU - Hermans, C. PY - 2008 DA - 2008// TI - Proline accumulation in plants: a review JO - Amino Acids VL - 35 UR - https://doi.org/10.1007/s00726-008-0061-6 DO - 10.1007/s00726-008-0061-6 ID - Verbrμggen2008 ER - TY - JOUR AU - Tunnacliffe, A. AU - Wise, M. J. PY - 2007 DA - 2007// TI - The continuing conundrum of the LEA proteins JO - Naturwissenschaften VL - 94 UR - https://doi.org/10.1007/s00114-007-0254-y DO - 10.1007/s00114-007-0254-y ID - Tunnacliffe2007 ER - TY - JOUR AU - Rajesh, S. AU - Manickam, A. PY - 2007 DA - 2007// TI - Prediction of functions for two LEA proteins from mung bean JO - Bioinformation VL - 1 UR - https://doi.org/10.6026/97320630001133 DO - 10.6026/97320630001133 ID - Rajesh2007 ER - TY - JOUR AU - Qiu, Z. B. AU - Wan, L. C. PY - 2013 DA - 2013// TI - The regulation of cambial activity in Chinese fir (Cunninghamia lanceolata) involves extensive transcriptome remodeling JO - New Phytologist VL - 199 UR - https://doi.org/10.1111/nph.12301 DO - 10.1111/nph.12301 ID - Qiu2013 ER - TY - JOUR AU - Xin, Z. PY - 2001 DA - 2001// TI - Cold comfort farm: the acclimation of plants to freezing temperatures JO - Plant Cell Environ VL - 23 UR - https://doi.org/10.1046/j.1365-3040.2000.00611.x DO - 10.1046/j.1365-3040.2000.00611.x ID - Xin2001 ER - TY - JOUR AU - Porankiewicz, J. AU - Wang, J. AU - Clarke, A. K. PY - 1999 DA - 1999// TI - New insights into the ATP-dependent Clp protease: Escherichia coli and beyond JO - Mol Microbiol VL - 32 UR - https://doi.org/10.1046/j.1365-2958.1999.01357.x DO - 10.1046/j.1365-2958.1999.01357.x ID - Porankiewicz1999 ER - TY - JOUR AU - Wang, B. AU - Guo, G. AU - Wang, C. AU - Lin, Y. AU - Wang, X. AU - Zhao, M. AU - Guo, Y. AU - He, M. AU - Zhang, Y. AU - Pan, L. PY - 2010 DA - 2010// TI - Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing JO - Nucleic Acids Res VL - 38 UR - https://doi.org/10.1093/nar/gkq256 DO - 10.1093/nar/gkq256 ID - Wang2010 ER - TY - JOUR AU - Srichuwonga, S. AU - Isonoa, N. AU - Mishimab, T. AU - Hisamatsua, M. PY - 2007 DA - 2007// TI - Structure of lintnerized starch is related to X-ray diffraction pattern and susceptibility to acid and enzyme hydrolysis of starch granules JO - Int J Biol Macromol VL - 37 UR - https://doi.org/10.1016/j.ijbiomac.2005.09.006 DO - 10.1016/j.ijbiomac.2005.09.006 ID - Srichuwonga2007 ER - TY - JOUR AU - Gomperts, B. AU - Kramer, I. M. AU - Tatham, P. E. R. PY - 2007 DA - 2007// TI - Signal transcription JO - Beijing Sci Publ VL - 7 ID - Gomperts2007 ER - TY - JOUR AU - Cooper, G. M. AU - Hausman, R. E. PY - 2012 DA - 2012// TI - The cell: a molecular approach JO - Beijing Sci Publ VL - 15 ID - Cooper2012 ER - TY - JOUR AU - Donald, W. H. AU - Rebecca, B. PY - 1996 DA - 1996// TI - Regulation of Cardiac Na+, Ca2+ Exchange and KATP Potassium Channels by PIP2 JO - Science VL - 273 UR - https://doi.org/10.1126/science.273.5277.956 DO - 10.1126/science.273.5277.956 ID - Donald1996 ER - TY - JOUR AU - Saijo, Y. AU - Hata, S. AU - Kyozuka, J. AU - Shimamoto, K. AU - Izui, K. PY - 2000 DA - 2000// TI - Over-expression of a single Ca2 + -dependent protein kinase confers both cold and salt/droμght tolerance on rice plants JO - Plant J VL - 23 UR - https://doi.org/10.1046/j.1365-313x.2000.00787.x DO - 10.1046/j.1365-313x.2000.00787.x ID - Saijo2000 ER - TY - JOUR AU - Ludwig, A. A. AU - Romeis, T. AU - Jones, J. D. G. PY - 2004 DA - 2004// TI - CDPK-mediated signalling pathways: specificity and cross-talk JO - J Exp Bot VL - 55 UR - https://doi.org/10.1093/jxb/erh008 DO - 10.1093/jxb/erh008 ID - Ludwig2004 ER - TY - JOUR AU - Agarwal, P. K. AU - Jha, B. PY - 2010 DA - 2010// TI - Transcription factors in plants and ABA dependent and independent abiotic stress signalling JO - Biol Plantarum VL - 54 UR - https://doi.org/10.1007/s10535-010-0038-7 DO - 10.1007/s10535-010-0038-7 ID - Agarwal2010 ER - TY - JOUR AU - Yoshida, R. AU - Hobo, T. AU - Ichimura, K. AU - Mizoguchi, T. AU - Takahashi, F. AU - Aronso, J. AU - Ecker, J. R. AU - Shinozaki, K. PY - 2002 DA - 2002// TI - ABA-activated SnRK2 protein kinase is required for dehydration stress signaling in Arabidopsis JO - Plant Cell Physiol VL - 43 UR - https://doi.org/10.1093/pcp/pcf188 DO - 10.1093/pcp/pcf188 ID - Yoshida2002 ER - TY - JOUR AU - Benjamini, Y. AU - Yekutieli, D. PY - 2001 DA - 2001// TI - The control of the false discovery rate in multiple testing under dependency JO - Ann Stat VL - 29 UR - https://doi.org/10.1214/aos/1013699998 DO - 10.1214/aos/1013699998 ID - Benjamini2001 ER - TY - JOUR AU - Gilmour, S. J. AU - Zarka, D. G. AU - Stockinger, E. J. AU - Salazar, M. P. AU - Houghton, J. M. AU - Thomashow, M. F. PY - 1998 DA - 1998// TI - Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression JO - Plant J VL - 16 UR - https://doi.org/10.1046/j.1365-313x.1998.00310.x DO - 10.1046/j.1365-313x.1998.00310.x ID - Gilmour1998 ER -