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Table 3 Categorization of Lilium lancifolium unigenes to KEGG biochemical pathways

From: Transcriptome profiling of the cold response and signaling pathways in Lilium lancifolium

KEGG categories Mapped-ko Unigene-NUM Ratio of no. Pathway-ID
Metabolic pathways 734 1784 11.23 ko01100
Biosynthesis of secondary metabolites 327 946 5.95 ko01110
Microbial metabolism in diverse environments 125 400 2.51 ko01120
mRNA surveillance pathway 48 256 1.61 ko03015
Ribosome 105 251 1.57 ko03010
Pyrimidine metabolism 63 250 1.57 ko00240
Biosynthesis of amino acids 95 237 1.49 ko01230
Cell cycle 50 233 1.46 ko04110
Carbon metabolism 71 229 1.44 ko01200
Splice some 87 223 1.40 ko03040
Protein processing in endoplasmic reticulum 71 208 1.31 ko04141
RNA transport 90 198 1.24 ko03013
Starch and sucrose metabolism 33 186 1.16 ko00500
Purine metabolism 77 169 1.06 ko00230
Plant-pathogen interaction 27 163 1.02 ko04626
Plant hormone signal transduction 38 158 0.97 ko04075
Epstein-barr virus infection 55 151 0.94 ko05169
Oxidative phosphorylation 70 150 0.94 ko00190
Homologous recombination 23 147 0.92 ko03440
RNA degradation 45 131 0.82 ko03018
Ubiquitin mediated proteolysis 55 128 0.81 ko04120
Glycolysis/Gluconeogenesis 30 128 0.81 ko00010
Endocytosis 38 127 0.79 ko04144
Amino sugar and nucleotide sugar metabolism 37 127 0.79 ko00520
Basal transcription factors 27 117 0.74 ko03022
Phenylpropanoid biosynthesis 16 109 0.68 ko00940
Ribosome biogenesis in eukaryotes 51 107 0.67 ko03008
Oocyte meiosis 29 106 0.66 ko04114
Viral carcinogenesis 38 104 0.66 ko05203
Cell cycle-yeast 47 102 0.64 ko04111
Insulin signaling pathway 19 102 0.64 ko04910
HTLV-I infection 40 101 0.63 ko05166
Fatty acid metabolism 10 100 0.62 ko00071
Pyruvate metabolism 28 96 0.60 ko00620
Others   7874 11.22