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Table 3 ADH forms in Xenopus laevis and Xenopus tropicalis

From: The Xenopusalcohol dehydrogenase gene family: characterization and comparative analysis incorporating amphibian and reptilian genomes

  

X. laevis

X. tropicalis

Class

Gene

Accession

Expression

Accession

Expression

ADH1

ADH1A

  

HF569235

Str.72514, 27790, 68808: intestine, oviduct, spleen, adipose tissue, liver, lung, stomach, tadpole

Q5I0S0

 

ADH1A1

n.a.

CF521684 (GenBank): kidney

  
 

ADH1A2

Q6IRQ3

Xl.18983: dorsal lip, heart, kidney, blastula

  
 

ADH1B

Q6DKD6

Xl.80710: liver

HF569236

Str.15510, 69558: adipose tissue, head, intestine, limb, liver, lung, ovary, oviduct, tail, tailbud embryo, tadpole, metamorphosis

O933311

Intestine, kidney, liver, stomach

Q5I0R0

Intestine, kidney, liver, air sac, tadpole (pronephros, liver)2

 

ADH1C

Q6IRQ0

Xl.9060: kidney, fat body

HF569237

Str.33643, 83367: intestine, lung, ovary, skin

ADH2

ADH2

Not found

Not found

HF569238

Str.5773: heart, limb, skin, intestine, tadpole, metamorphosis

ADH3

ADH3

AJ575267

Xl.23916: brain, digestive, head, limb, ovary, spleen, testis, oocyte, gastrula, tadpole, metamorphosis

HF569239

Str.16550: head, heart, intestine, kidney, lung, ovary, oviduct, skin, spleen, testis, thymus, gastrula, neurula, tailbud embryo, tadpole

Q4V813

Q5HZT1

Liver, stomach, kidney, intestine, oocyte, ovary

ADH7

ADH7

n.a.

CB5928723 (GenBank): testis

HF569240

Str.27783, 70262, 73157: brain, gastrula, tadpole

Q5M7K9

ADH8

ADH8A

n.a.

Xl.21891: neurula

HF569241

Str.72032: head, tadpole

 

ADH8B

AJ566764

Xl.53979: limb, metamorphosis

HF569242

Str.88986: stomach, skin, limb

Q4R0Y8

Esophagus, intestine, laringe, stomach, skin

ADH9

ADH9

Q7SYU6

Xl.21584: brain, metamorphosis

HF569243

 

Esophagus, stomach

Esophagus, skin, stomach2

ADH10

ADH10A

Q6P7G1

Xl.81589, 34490: kidney, testis, metamorphosis

HF569244

Str.26581: kidney, head, intestine, liver, spleen, tailbud embryo, tadpole

 

ADH10B

Q6AZL8

Xl.48167: kidney, testis

HF569245

 
  1. All Xenopus ADHs supported by evidence at the protein, transcript or gene level, are included, together with their accession numbers and expression sites. A single ADH1A gene exists in X. tropicalis while two genes are found in X. laevis. In contrast, no X. laevis ADH2 sequence has been found to the date. Accession numbers are taken from UniProt or EMBL (all the EMBL sequences, in bold, are from this study). Expression sites were mostly obtained from UniGene (cluster numbers are provided), but also from GenBank (where indicated). For X. laevis, results of expression experiments from our group (in bold) and other sources, are also included. 1Partial sequence, probably another allele of this gene; 2Hoffmann et al.[22]; 3Partial sequence, containing frameshift mutations; n.a.: not available.
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BMC Genomics

ISSN: 1471-2164

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