Description of Pfam domain | Number of C. japonica transcriptsa | Pfam accession |
---|---|---|
Protein kinase domain | 563 | PF00069 |
NB-ARC domain | 486 | PF00931 |
Leucine-rich repeat | 197 | PF13855 (including PF07714) |
Tyrosine kinase | 174 | PF07714 |
RNA recognition motif | 173 | PF00076 |
Cytochrome P450 | 171 | PF00067 |
PPR repeat family | 129 | PF13041 |
UDP-glucoronosyl and UDP-glucosyl transferase | 113 | PF00201 |
Reverse transcriptase (RNA-dependent DNA polymerase) | 110 | PF00078 (including PF07727) |
WD domain, G-beta repeat | 102 | PF00400 |
TIR domain | 98 | PF01582 |
DEAD/DEAH box helicase | 91 | PF00270 |
Alpha/beta hydrolase fold | 82 | PF12697 |
AAA proteins | 80 | PF00004 |
RING finger domain | 78 | PF13639 |
ATP-binding domain of ABC transporters | 77 | PF00005 |
Sugar (and other) transporter | 72 | PF00083 |
SET domain | 67 | PF00856 |
Mitochondrial carrier protein | 65 | PF00153 |
Protein phosphatase 2C | 65 | PF00481 |