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Figure 3 | BMC Genomics

Figure 3

From: From root to fruit: RNA-Seq analysis shows that arbuscular mycorrhizal symbiosis may affect tomato fruit metabolism

Figure 3

Clustering and heatmap of expression values for DEGs in the cell wall structure-related gene class. Light and dark blue indicate higher and lower expression values, respectively. Gene descriptions are as reported in Tomato Genome Consortium (2012). The heatmap was generated starting from DESeq normalized counts and further processed with custom scripts based on heatmap.2 function as available in the ‘gplots’ Bioconductor package and transformation function VST (DESEq package).

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BMC Genomics

ISSN: 1471-2164

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