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Table 4 Mycorrhiza-regulated genes involved in carbohydrate and cell-wall metabolism in turning tomato fruit

From: From root to fruit: RNA-Seq analysis shows that arbuscular mycorrhizal symbiosis may affect tomato fruit metabolism

Gene ID

ITAG2.3_descriptions

Description SL2.40

Log2ratio MYC vs CONTR

Carbohydrate metabolism

Solyc10g083290.1.1

Beta-fructofuranosidase insoluble isoenzyme 2

Cell-wall invertase

4,35

Solyc09g011810.2.1

Fructose-1 6-bisphosphatase class 1

 

3,16

Solyc02g082920.2.1

Endochitinase (Chitinase)

Acidic 26 kDa endochitinase

1,76

Solyc11g007990.1.1

Malate dehydrogenase

Malate dehydrogenase

1,66

Solyc04g071340.2.1

Fructose-1 6-bisphosphatase class 1

 

1,46

Solyc10g086730.1.1

Fructose-1 6-bisphosphatase class 1

 

1,35

Solyc05g052600.2.1

Fructose-1 6-bisphosphatase class 1

Chloroplast sedoheptulose-1,7-bisphosphatase

1,08

Solyc05g013810.2.1

Glycosyl hydrolase family 5 protein/cellulase

 

1,06

Solyc03g113030.2.1

Aldse 1-epimerase-like protein

 

-0,82

Solyc08g082170.2.1

Glycoside hydrolase family 28 protein

 

-0,83

Solyc04g016470.2.1

Beta-1 3-glucanase

Glucan endo-1,3-beta-D-glucosidase

-1,31

Solyc02g084720.2.1

Beta-galactosidase

Beta-galactosidase

-1,40

Solyc03g083910.2.1

Acid beta-fructofuranosidase

Acid beta-fructofuranosidase

-1,63

Solyc07g056000.2.1

Xyloglucan endotransglucosylase/hydrolase 7

Xyloglycan endo-transglycosylase

-1,70

Solyc03g093130.2.1

Xyloglucan endotransglucosylase/hydrolase 9

Xyloglucan endotransglucosylase-hydrolase XTH3

-2,28

Solyc01g111340.2.1

Endo-1 4-beta-xylanase

 

-2,33

Solyc01g099630.2.1

Xyloglucan endotransglucosylase/hydrolase 5

Probable xyloglucan endotransglucosylase/hydrolase 1

-2,37

Solyc03g093120.2.1

Xyloglucan endotransglucosylase/hydrolase 9

 

-2,49

Solyc05g005170.2.1

Polygalacturonase 2

 

-5,01

Other cell wall genes

Solyc07g064170.2.1

Pectinesterase

Pectinesterase 1

-1,15

Solyc03g123630.2.1

Pectinesterase

Pectinesterase/pectinesterase inhibitor U1

-1,34

Solyc01g112000.2.1

Expansin-like protein

Expansin-like protein

-1,53

Solyc06g051800.2.1

Expansin

Expansin 1 protein

-1,62