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Table 1 Brief description of the datasets used

From: How to get the most from microarray data: advice from reverse genomics

Cancer

Reference no.

GSE_ID

Platform

No. of probes*

Sample size

AN

T

Breast

[12]

GSE10780

Affymetrix HG-U133_Plus_2

35764

142

42

Breast

[13]

GDS3716

Affymetrix HuEx-1_0-st

21169

24

18

Colorectal

[14]

GSE31737

Affymetrix HG-U133_Plus_2

17528

40

40

Lung

[15]

GSE19188

Affymetrix HG-U133_Plus_2

38597

65

91

Lung

[16]

GSE18842

Affymetrix HG-U133A

38578

45

45

Prostate

[17]

GSE21034

Affymetrix HuEx-1_0-st

27090

29

29

Prostate

[18]

GSE6919

Affymetrix HG_U95Av2

27964

63

63

  1. *Only probes linked to a single gene were used in the analysis.
  2. AN, adjacent normal tissue; T, tumor tissue.