From: How to get the most from microarray data: advice from reverse genomics
Dataset | Trait | Mean RRCGs | Mean OGs | Z | Pvalue | Rank |
---|---|---|---|---|---|---|
BC_GSE10780 | -LOG(P) | 5.81 | 4.36 | 2.33 | 0.019828 | 6 |
m(AN) | 6.65 | 6.16 | 3.09 | 0.002 | 5 | |
m(T) | 6.77 | 6.18 | 3.61 | 0.0003 | 3 | |
FC | 0.37 | 0.25 | 3.43081 | 0.000602 | 4 | |
sd(AN) | 0.31 | 0.41 | 3.88355 | 0.000103 | 2 | |
sd(T) | 0.62 | 0.45 | 4.52874 | 0.000006 | 1 | |
BC_GSE3716 | -LOG(P) | 0.53 | 0.64 | 1.27891 | 0.200931 | 2 |
m(AN) | 7.74 | 7.43 | 0.92 | 0.36 | 4 | |
m(T) | 7.79 | 7.50 | 0.79 | 0.43 | 5 | |
FC | 0.26 | 0.27 | 0.26448 | 0.791411 | 6 | |
sd(AN) | 0.82 | 0.79 | 1.2498 | 0.211373 | 3 | |
sd(T) | 0.89 | 0.80 | 2.71994 | 0.00653 | 1 | |
CC_GSE31737 | -LOG(P) | 2.99 | 2.38 | 1.41345 | 0.157523 | 6 |
m(AN) | 5.24 | 4.78 | 2.11 | 0.04 | 4 | |
m(T) | 5.24 | 4.78 | 2.06 | 0.04 | 5 | |
FC | 0.40 | 0.25 | 2.78341 | 0.005379 | 3 | |
sd(AN) | 0.52 | 0.40 | 3.52082 | 0.00043 | 2 | |
sd(T) | 0.57 | 0.43 | 4.12776 | 0.000037 | 1 | |
LC_GSE19188 | -LOG(P) | 6.47 | 5.38 | 1.91017 | 0.056112 | 6 |
m(AN) | 6.55 | 6.24 | 2.01 | 0.04 | 5 | |
m(T) | 6.71 | 6.57 | 2.11 | 0.04 | 4 | |
FC | 0.61 | 0.38 | 4.50134 | 0.000007 | 3 | |
sd(AN) | 0.52 | 0.35 | 5.09778 | <10-6 | 2 | |
sd(T) | 0.84 | 0.56 | 7.51503 | <10-6 | 1 | |
LC_GSE18842 | -LOG(P) | 6.01 | 4.32 | 3.59092 | 0.00033 | 6 |
m(AN) | 6.67 | 5.75 | 3.71 | 0.0002 | 5 | |
m(T) | 6.81 | 5.75 | 4.91 | 0.000001 | 4 | |
FC | 0.78 | 0.39 | 5.99594 | <10-6 | 2 | |
sd(AN) | 0.51 | 0.33 | 5.1629 | <10-6 | 3 | |
sd(T) | 0.82 | 0.47 | 8.26221 | <10-6 | 1 | |
PC_GSE6919 | -LOG(P) | 0.94 | 0.87 | 0.74248 | 0.457796 | 6 |
m(AN) | 7.16 | 7.01 | 0.92 | 0.36 | 5 | |
m(T) | 7.18 | 6.99 | 1.04 | 0.3 | 4 | |
FC | 0.17 | 0.14 | 1.47057 | 0.141409 | 3 | |
sd(AN) | 0.63 | 0.59 | 1.84723 | 0.064715 | 2 | |
sd(T) | 0.69 | 0.64 | 2.15976 | 0.030792 | 1 | |
PC_GSE21034 | -LOG(P) | 1.69 | 1.69 | 0.74953 | 0.453541 | 6 |
m(AN) | 8.09 | 7.87 | 2.16 | 0.03 | 4 | |
m(T) | 8.15 | 7.83 | 2.25 | 0.02 | 3 | |
FC | 0.24 | 0.16 | 1.98956 | 0.04664 | 5 | |
sd(AN) | 0.32 | 0.27 | 2.66829 | 0.007624 | 2 | |
sd(T) | 0.34 | 0.29 | 2.99909 | 0.002708 | 1 |