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Table 4 Differences between recently reported cancer genes and all other genes in the human genome

From: How to get the most from microarray data: advice from reverse genomics

Dataset Trait Mean RRCGs Mean OGs Z Pvalue Rank
BC_GSE10780 -LOG(P) 5.81 4.36 2.33 0.019828 6
m(AN) 6.65 6.16 3.09 0.002 5
m(T) 6.77 6.18 3.61 0.0003 3
FC 0.37 0.25 3.43081 0.000602 4
sd(AN) 0.31 0.41 3.88355 0.000103 2
sd(T) 0.62 0.45 4.52874 0.000006 1
BC_GSE3716 -LOG(P) 0.53 0.64 1.27891 0.200931 2
m(AN) 7.74 7.43 0.92 0.36 4
m(T) 7.79 7.50 0.79 0.43 5
FC 0.26 0.27 0.26448 0.791411 6
sd(AN) 0.82 0.79 1.2498 0.211373 3
sd(T) 0.89 0.80 2.71994 0.00653 1
CC_GSE31737 -LOG(P) 2.99 2.38 1.41345 0.157523 6
m(AN) 5.24 4.78 2.11 0.04 4
m(T) 5.24 4.78 2.06 0.04 5
FC 0.40 0.25 2.78341 0.005379 3
sd(AN) 0.52 0.40 3.52082 0.00043 2
sd(T) 0.57 0.43 4.12776 0.000037 1
LC_GSE19188 -LOG(P) 6.47 5.38 1.91017 0.056112 6
m(AN) 6.55 6.24 2.01 0.04 5
m(T) 6.71 6.57 2.11 0.04 4
FC 0.61 0.38 4.50134 0.000007 3
sd(AN) 0.52 0.35 5.09778 <10-6 2
sd(T) 0.84 0.56 7.51503 <10-6 1
LC_GSE18842 -LOG(P) 6.01 4.32 3.59092 0.00033 6
m(AN) 6.67 5.75 3.71 0.0002 5
m(T) 6.81 5.75 4.91 0.000001 4
FC 0.78 0.39 5.99594 <10-6 2
sd(AN) 0.51 0.33 5.1629 <10-6 3
sd(T) 0.82 0.47 8.26221 <10-6 1
PC_GSE6919 -LOG(P) 0.94 0.87 0.74248 0.457796 6
m(AN) 7.16 7.01 0.92 0.36 5
m(T) 7.18 6.99 1.04 0.3 4
FC 0.17 0.14 1.47057 0.141409 3
sd(AN) 0.63 0.59 1.84723 0.064715 2
sd(T) 0.69 0.64 2.15976 0.030792 1
PC_GSE21034 -LOG(P) 1.69 1.69 0.74953 0.453541 6
m(AN) 8.09 7.87 2.16 0.03 4
m(T) 8.15 7.83 2.25 0.02 3
FC 0.24 0.16 1.98956 0.04664 5
sd(AN) 0.32 0.27 2.66829 0.007624 2
sd(T) 0.34 0.29 2.99909 0.002708 1
  1. RRCG, recently reported cancer genes; OG, other genes.