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Table 1 General features of C. pecorum PV3056/3, P787 and W73 compared with the type strain E58 [CP002608]

From: Genome sequencing and comparative analysis of three Chlamydia pecorum strains associated with different pathogenic outcomes

 

C. pecorum(PV3056/3)

C. pecorum(P787)

C. pecorum(W73)

C. pecorum(E58) [[23]]

Date of isolation

1991

1977

1989

Circa 1940

Country

Italy

Scotland

Northern Ireland

USA

Source

Cow, cervical swab

Sheep, synovial fluid

Sheep, faeces

Calf, brain

Disease pathotype

Metritis

Polyarthritis

Asymptomatic/enteric

Encephylomyelitis

Genome size (bp)

1,104,552

1,106,412

1,106,534

1,106,197

% GC of genome

41.1

41.1

41.1

41.1

% coding

91.9

92.1

92.1

91.9

Predicted CDS

927

928

928

1073

Predicted no. of pseudogenes

6

3

3

1

No. of CDS with functional assignment

628 (67.7%)

629 (67.8%)

630 (67.9%)

-

No. of pmp proteins

15

15

15

15

No. of tRNA genes

38

38

38

38

No. of rRNA operons

1

1

1

1

No. of sRNA molecules

3

3

3

3

Location of OriC region

1104229–147 nt (471 nt)

1106263–147 nt (296 nt)

1106389–147 nt (295 nt)

305941–306155 nt (215 nt)