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Table 1 Characteristics of white lupin de novo assemblies

From: RNA-seq analysis identifies an intricate regulatory network controlling cluster root development in white lupin

Parameter LAGI01* This work^ LAGI02#
Kmer length 29 67 -
No. of reads 277,224,180 133,045,174 -
No. of contigs 125,821 46,383 65,097
Average contig length 1,155 896 1,625
% GC 39.6 40.03 39.4
Longest contig 15,514 28,229 26,640
Total bases 145,286,000 41,550,474 105,789,289
  1. *reference: [26].
  2. ^de novo assembly of the five analysed root tissues.
  3. #merged assemblies after removal of reads < 200 bp and with no BLAST hit.