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Figure 2 | BMC Genomics

Figure 2

From: From SNP co-association to RNA co-expression: Novel insights into gene networks for intramuscular fatty acid composition in porcine

Figure 2

Co-association network based on the AWM approach. (A) Entire network with 1,096 nodes (i.e., genes or SNPs) and 111,198 interactions. The color spectrum ranges from green to red for low and high density, respectively. (B) Subset of the network showing the best trio of transcription factors: NCOA2, EP300 and FHL2. Node color corresponding with the functional classification of the in-silico predicted target gene as follows: TF (red), lipid metabolism process (blue), carbohydrate metabolisms (green), development process (orange) and finally, white nodes represent genes with others functional classification. Node shape indicates classification as: diamond (TF involved in lipid metabolism), triangle (TF), ellipse (other genes).

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BMC Genomics

ISSN: 1471-2164

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