Skip to main content

Table 2 Concordance validation between the co-association and the co-expression networks for the best TF trio and in adipose and liver tissues

From: From SNP co-association to RNA co-expression: Novel insights into gene networks for intramuscular fatty acid composition in porcine

Tissue

TF

Connections in the AWM co-association networkA

Connections in the qPCR co-expression networkA

Validated connections

% Validation

Adipose

NCOA2

23

21

14

60.8

 

EP300

9

19

4

44.4

 

FHL2

10

9

2

20.0

Liver

NCOA2

26

18

9

34.6

 

EP300

12

28

5

41.6

 

FHL2

14

13

2

14.3

  1. AConnections deemed significant according to the PCIT algorithm.