A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

Table 1 Number of markers, genetic length and anchored scaffolds for each linkage group

Linkage group	Total markers	Female map		Male map		Anchored scaffolds
Linkage group	Total markers	Number of markers	Length (cM)	Number of markers	Length (cM)	Number^*	Size (bp)
1	154	83	139.2	73	96.9	86	10,779,947
2	185	109	109.7	84	85.1	80	11,549,278
3	127	60	74.1	70	19.6	46	6,166,433
4	193	100	93.5	102	66.7	84	11,926,296
5	144	88	117.9	58	96.2	73	8,932,484
6	133	72	84.1	63	53.0	52	6,456,950
7	227	106	138.4	127	99.5	100	14,079,542
8	163	89	112.8	79	92.9	77	7,915,729
9	204	101	101.7	108	76.3	95	11,854,887
10	123	63	56.1	66	40.2	59	7,250,929
11	152	86	79.8	75	48.0	64	5,754,071
12	154	95	80.9	65	53.0	60	8,740,852
13	131	67	74.8	67	63.4	57	5,716,409
14	133	71	68.7	63	52.9	61	8,348,650
15	88	71	100.4	22	76.3	46	4,849,938
16	151	87	89.0	69	79.4	67	6,927,157
17	54	32	52.9	22	55.1	21	915,430
18	123	68	57.9	60	47.2	54	3,975,438
19	148	79	116.9	73	92.8	69	9,131,346
Total	2,787	1,527	1748.8	1,346	1294.5	1,251	151,271,766

^*Scaffolds that are anchored to two or more loci on the linkage map are included.

ISSN: 1471-2164