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Table 2 Summary of Hevea brasiliensis transcriptome sequencing

From: De novo transcriptome analysis of Hevea brasiliensistissues by RNA-seq and screening for molecular markers

Sample Number of reads Aligned reads Number of contigs Average contig size N50 Q40 plus*
RRIM600 and RRIM600 OPS 523,371 80.69% 19,708 936 969 94.07%
  1. * indicates the bases with a Phred-like consensus quality score of at least 40 (meaning a 1:10000 chance of the base being wrong).
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BMC Genomics

ISSN: 1471-2164

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