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Table 1 Caleosin genes from four species a

From: Characterization of the caleosin gene family in the Triticeae

  T. aestivum Homologues
Gene Chromosome Nucleotide aa B. distachyon b H. vulgare b O. sativa (Japonica) b
Clo1 2AL 1600 302 Bradi5g15410 gi|34538472 gi297723297
Clo1 2BL 1154 302    
Clo1 2DL 1178 302    
Clo2 2AL 963 244 Bradi5g15427 gi|34538476  
Clo2 2BL 986 245 Bradi5g15417   
Clo2 2DL 877 245    
Clo3 6AS 907 217 Bradi1g70390   
Clo3 6BS 818 215    
Clo3 6DS 793 220    
Clo4 3AL 1039 217 Bradi1g70400   gi115467408
Clo4 3B 1075 217 Bradi1g44207   
Clo4 3DL 1084 217    
Clo5 6AL 1053 229 Bradi3g56810 gi|6900307  
Clo5 6BL 1051 224    
Clo5 6DL 1150 222    
Clo6 6AL 827 216 Bradi3g56820 gi|151420803 gi115467410
Clo6 6BL 735 205    
Clo6 6DL 815 214    
Clo7 7AS 827 198 Bradi1g44200 gi|151419867 gi115448521
Clo7 7BS 917 213    
Clo7 7DS 958 212    
Clo8 7AS 1102 214   gi|326515641  
Clo8 7BS 962 213    
Clo8 7DS 939 215    
Clo9 4AS 994 232 Bradi1g69571 gi|151426143  
Clo9 4BS 1129 235    
Clo9 4DL 1164 233    
Clo10 2AL 907 234   gi|326490092 gi115459382
Clo10 2BL 866 244    
Clo10 2DL 897 243    
Clo10 2DL 836 244    
Clo11 2AL 907 234   ViroBlast  
Clo11 2BL 1062 244    
Clo11 2DL 932 242    
  1. aThe full set of complete caleosin sequences for wheat and rye can be found in Additional file 16. The corrected Hv-Clo6 cDNA of H. vulgare sequence and Hv-Clo8 derived from ESTs and the Brachypodium sequence Bradi1g70400 with an extended CDS are included in Additional file 17.
  2. bCaleosin sequences for Brachypodium, H. vulgare, and O. sativa, represent paralogous members of the gene family, and do not correspond to the individual homeologous gene copies found in wheat.