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Table 3 Genes which are down regulated in large follicles with respect to small follicles†

From: Transcriptome profiling of granulosa cells of bovine ovarian follicles during growth from small to large antral sizes

Gene symbol

Fold change

Gene symbol

Fold change

Gene symbol

Fold change

Cell cycle

RPRM

5.8

    

Cell morphology

JAKMIP1

20.8

MYO10

6.8

ACTA1

3.4

SEPT4

15.3

MFAP2

4.6

MYO1D

3.0

Cytokines, hormones and receptors

KIT

23.1

IL33

3.6

GPR77

3.2

ANGPT2

11.5

PTPRN2

3.6

ANGPTL2

3.1

RYR2

7.0

SHISA2

3.5

F2RL2

3.1

PDGFC

4.6

CMTM8

3.4

SFRP4

3.0

FGFR2

3.7

IL20RA

3.4

  

Directional cell growth

FEZ1

3.8

EPHA1

3.2

  

Extracellular matrix and synthesis

LAMC2

3.4

COL1A1

3.0

  

Intercellular and cell to matrix adhesion

NEDD9

5.9

CDH2

4.0

NPNT

3.2

Protein trafficking

SNX31

6.0

ADCK3

3.4

MZB1

3.1

CLU

4.9

    

Proteolysis and inhibition

*PTI

5.6

LTF

4.0

EPHX1

3.4

MMP16

4.0

PRSS35

3.7

TRIM2

3.3

RNA processing

CPEB1

3.9

    

Transcription regulation

MYC

16.4

FOS

4.0

EMX2

3.1

HOPX

13.8

FHL2

3.3

MSX1

3.1

TGIF1

6.1

HES1

3.2

  

Transport

SVOPL

8.6

NUP210

4.7

AQP1

3.2

NALCN

6.0

ABCC8

4.7

FXYD6

3.2

AP3B2

5.5

STARD10

3.4

ZP3

3.2

Other enzymes

GATM

11.1

MAN1A1

4.2

PTGS2

3.5

CA14

8.8

ENPP1

4.1

ABAT

3.5

PAPSS2

7.8

HMOX1

4.1

PFKFB3

3.2

RASL11B

6.8

PHGDH

3.7

CYP2C19

3.1

GALNT13

5.3

RENBP

3.6

AKR1C3

3.1

AKR1B1

4.5

DDO

3.6

GYLTL1B

3.0

Other signalling

MEST

28.7

GUCA1A

5.1

*RGS2

3.4

TNFAIP2

17.5

HLA-A

4.4

APBB2

3.2

IHH

16.6

*CHRDL1

3.7

BANK1

3.1

CARTPT

14.0

SASH1

3.5

*TCRA

3.0

Other

LRRC17

7.1

TTN

3.6

MMD

3.1

STAC3

3.9

SEL1L3

3.6

BTNL1

3.1

LRRC1

3.8

CCDC3

3.2

TMIGD2

3.0

  1. †(≥ 3-fold, P < 0.05) and categorised by function. Genes are listed in descending order of fold change in each category. Significance was determined by Benjamini-Hochberg post-hoc test for multiple corrections following one way ANOVA.
  2. *indicates genes determined from the Partek analysis based on the Affymetrix annotations which were not assigned identities by IPA.