Table 6 Genomic regions with evidence of recent selection using haplotype homozygosity
From: Selection for complex traits leaves little or no classic signatures of selection
Breed | BTA | Sweep location & size (Mbp) | Type 1 & 2 loci | ||
|---|---|---|---|---|---|
Beginning | End | Length | |||
Limousin | 2 | 0 | 13.85 | 13.85 | MSTN |
Hereford | 2 | 68.85 | 74.95 | 6.1 | Â |
Jersey | 3 | 38.15 | 47.8 | 9.65 | Â |
Jersey | 3 | 50.95 | 57.7 | 6.75 | Â |
Shorthorn | 3 | 69.75 | 88.4 | 18.65 | Â |
Angus | 3 | 89.6 | 94.65 | 5.05 | Â |
Shorthorn | 4 | 67.15 | 73 | 5.85 | Â |
Murray Grey | 5 | 40.65 | 61.8 | 21.15 | PMEL |
Charolais | 5 | 52.8 | 64.75 | 11.95 | PMEL |
Hereford | 6 | 67.85 | 79.35 | 11.5 | KIT |
Jersey | 7 | 36.3 | 48.45 | 12.15 | Â |
Angus | 7 | 42.3 | 47.75 | 5.45 | Â |
Shorthorn | 11 | 34.1 | 40.65 | 6.55 | Â |
Shorthorn | 13 | 57.45 | 66.45 | 9 | Â |
Charolais | 14 | 19.75 | 29.55 | 9.8 | PLAG1 |
Angus | 16 | 38.5 | 47.75 | 9.25 | Â |
Shorthorn | 16 | 39.65 | 48.85 | 9.2 | Â |
Holstein | 16 | 40.1 | 47.05 | 6.95 | Â |
Charolais | 16 | 41.45 | 46.9 | 5.45 | Â |
Jersey | 20 | 1.5 | 7.1 | 5.6 | Â |
Jersey | 20 | 22.8 | 29 | 6.2 | Â |
Holstein | 20 | 29.85 | 34.9 | 5.05 | GHR |
Murray Grey | 22 | 33.2 | 39.45 | 6.25 | Â |
Murray Grey | 24 | 22.35 | 29.35 | 7 | Â |
Holstein | 26 | 17.6 | 24.3 | 6.7 | Â |