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Table 4 Mapping of 15 Asian genomes onto the VCG, YH and GRCh37 reference genomes

From: VCGDB: a dynamic genome database of the Chinese population

  CDX samples HG00879 HG00844 HG00851 HG00864 HG00879
Reference GRCh37 46,809,092 54,343,732 58,459,936 41,735,844 46,809,092
  (96.14%) (95.58%) (97.78%) (97.80%) (96.14%)
  YH 46,963,414 54,578,732 58,711,122 41,929,952 46,963,414
  (96.46%) (95.99%) (98.20%) (98.25%) (96.46%)
  VCG 47,025,644 54,677,084 58,817,318 42,017,702 47,025,644
  (96.59%) (96.16%) (98.37%) (98.46%) (96.59%)
  CHD samples NA18698 NA18699 NA18126 NA18126 NA18691
Reference GRCh37 9,570,212 9,900,966 12,832,078 11,818,302 15,160,036
  (74.52%) (83.42%) (70.94%) (64.55%) (61.13%)
  YH 9,554,028 9,899,632 12,825,240 11,826,910 15,179,378
  (74.39%) (83.41%) (70.90%) (64.60%) (61.20%)
  VCG 9,590,720 9,931,332 12,870,814 11,880,666 15,228,994
  (74.68%) (83.68%) (71.16%) (64.89%) (61.40%)
  JPT samples NA18988 NA18985 NA19084 NA18984 NA18960
Reference GRCh37 31,213,781 4,235,400 34,476,427 9,353,246 71,376,941
  (89.77%) (97.06%) (98.70%) (96.88%) (89.93%)
  YH 31,338,365 4,236,640 34,514,636 9,359,975 71,711,466
  (90.13%) (97.09%) (98.81%) (96.95%) (90.35%)
  VCG 31,410,518 4,236,680 34,500,530 9,361,169 71,898,286
  (90.34%) (97.09%) (98.76%) (96.96%) (90.59%)