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Table 2 Top 25 expressed genes along the time course

From: Gene expression profile analysis of Manila clam (Ruditapes philippinarum) hemocytes after a Vibrio alginolyticus challenge using an immune-enriched oligo-microarray

Sequence description

3 hpc FC

Sequence description

24 hpc FC

Dynein light chain flagellar outer arm

48.91

Mariner mos1 transposase

13.2

Interleukin-17D

23.7

pdz and lim domain 5

6.31

Ras-related c3 botulinum toxin substrate 3

11.05

Zygote arrest protein 1

5.62

Barrier-to-autointegration factor

10.81

Monomeric sarcosine oxidase

5.57

Prothrombin

9.93

Cytochrome c-type heme lyase

5.45

Perlucin

7.94

Titin

5.27

Cubilin

6.23

Twitchin

4.77

Ets-related transcription factor elf-5

6.19

Pin2 terf1-interacting telomerase inhibitor 1

4.43

Pre-mrna-splicing factor cwc24

5.28

Leukocyte receptor cluster member 1 homolog

4.34

Adp-ribosyl cyclase

5

SART-3

4.19

Insoluble matrix shell protein 5

4.81

Myosin heavy striated muscle

4.03

MAPKKK1

3.92

Galaxin

3.45

Heat shock protein 70

3.91

Thap domain-containing protein 9

3.23

40s ribosomal protein s12

3.59

Calponin 3

3.09

HMG box transcription factor Sox17

3.57

Microtubule-associated protein futsch

2.94

LTBP-4

3.56

Nuclear speckle splicing regulatory protein 1

2.94

Histone acetyltransferase kat6a

3.54

Staphylococcal nuclease dom-cont protein 1

2.92

Calmodulin

3.46

Peroxisomal sarcosine oxidase

−6.9

Nucleolar complex protein 4 homolog

3.33

Mosc domain-containing protein mitochondrial

−4.03

Phosphoinositide 3-kinase adapter protein 1

3.27

Aldose 1-epimerase

−3.88

Cytochrome p450 2d6

3.21

Nuclease harbi1

−3.8

Electron transfer flavoprotein

−67.28

Lysocardiolipin acyltransferase 1

−3.34

Complement component c3

−12.03

Nuclear pore complex protein nup107

−3.17

Chaperonin

−6.62

Hamartin

−3.09

Collagen alpha-1 chain precursor

−3.17

Selectin

−2.95

Sequence description

8 hpc FC

Sequence description

72 hpc FC

Ganglioside gm2 activator

25.86

Mantle gene 6

52.66

Udp-glucose 4-epimerase

17.86

Serum amyloid a-3 protein precursor

19.53

Probable cubilin precursor

13.74

Elongation factor 1-gamma

7.95

Ets domain-containing protein elk-3

10.09

Biotin carboxylase

7.14

tnf receptor-associated factor 6

9.69

Kazal-type proteinase inhibitor protein

6.96

Nuclear factor nf-kappa-b p105 subunit

9.49

Abc transporter related protein

5.55

n-acylethanolamine-hydrolyzing acid amidase

9.44

Fizzy-related protein homolog

3.36

Pathogenesis-related protein 5

8.81

Nadh dehydrogenase 1 alpha subcomplex

2.47

Transmembrane protein 205

7.14

Sarcoplasmic calcium-binding protein

−25.5

Peptidyl-prolyl cis-trans isomerase b

6.64

High-affinity Na-dependent carnitine cotransporter

−17.69

Pro-neuregulin-2 membrane-bound isoform

6.42

Aragonite-binding protein

−12.9

Defense protein

5.56

Cytidine deaminase

−12.29

Peptidoglycan-recognition protein

4.94

Cat eye syndrome critical region protein 5

−9.37

Ficolin-2

4.85

Aldehyde cytosolic 2

−8.3

Cerebellin-3

−46.98

Lysozyme

−7.67

17-beta-hydroxysteroid dehydrogenase 14

−18.9

Glutamine synthetase/glutamate decarboxylase

−6.71

Complement c1q TNF-related protein 6

−12.62

Lambda-crystallin

−5.72

Ureidoglycolate hydrolase

−12.39

Organic cation transporter 1

−5.17

Sodium-dependent serotonine

−12.02

Dna-directed rna polymerase ii subunit rpb3

−4.52

Cytochrome p450 2u1

−9.19

Monocarboxylate transporter 5

−4.14

Organic cation transporter protein

−7.44

Cholinesterase

−3.96

Chitotriosidase

−7.41

Muscle lim protein 1

−3.92

Protein acn9 mitochondrial precursor

−6.89

Probable 4-hydroxy-2-oxoglutarate mitochondrial

−3.46

C1q domain containing protein

−6.84

Protein nlrc3-like

−3.19

N-acetylneuraminate lyase

−5.53

Beta-microseminoprotein

−3.03

  1. In bold, downregulated transcripts.