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Table 2 Comparison of eggNOG assignments for Ensifer adhaerens OV14, Agrobacterium tumefaciens C58, and Sinorhizobium meliloti 1021

From: Genome sequence of Ensifer adhaerens OV14 provides insights into its ability as a novel vector for the genetic transformation of plant genomes

eggNOG functional category

Shared by 3 species

OV14 & C58 only

OV14 & 1021 only

C58 & 1021 only

OV14 only

C58 only

1021 only

Information storage and processing

       

[J] Translation, ribosomal structure and biogenesis

143

4

18

3

10

14

10

[K] Transcription

160

58

135

19

140

116

83

[L] Replication, recombination and repair

99

16

40

7

42

27

37

[B] Chromatin structure and dynamics

1

0

0

0

1

0

0

Cellular processes and signaling

       

[D] Cell cycle control, cell division, chromosome partitioning

22

2

5

0

2

6

5

[V] Defense mechanisms

28

4

12

3

17

11

12

[T] Signal transduction mechanisms

83

30

49

5

35

45

35

[M] Cell wall/membrane/envelope biogenesis

119

16

59

5

34

49

30

[N] Cell motility

31

2

5

0

2

4

3

[U] Intracellular trafficking, secretion, and vesicular transport

34

13

13

10

16

13

9

[O] Posttranslational modification, protein turnover, chaperones

112

8

29

2

21

13

17

Metabolism

       

[C] Energy production and conversion

164

21

82

14

52

55

58

[G] Carbohydrate transport and metabolism

194

38

121

17

76

61

59

[E] Amino acid transport and metabolism

317

51

128

27

120

118

61

[F] Nucleotide transport and metabolism

67

7

14

3

7

7

5

[H] Coenzyme transport and metabolism

97

6

29

3

10

12

9

[I] Lipid transport and metabolism

96

9

48

9

32

36

26

[P] Inorganic ion transport and metabolism

140

23

46

11

35

57

41

[Q] Secondary metabolites biosynthesis, transport and catabolism

56

12

45

6

36

15

31

Poorly characterized

       

[R] General function prediction only

151

39

90

14

97

80

56

[S] Function unknown

340

81

313

38

263

271

245