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Table 4 Comparative analysis for the presence/absence of genes involved in attachment to plant cell that are located in the genomic background (not on Ti plasmid) of Ensifer adhaerens OV14, Agrobacterium tumefaciens C58, and Sinorhizobium meliloti 1021

From: Genome sequence of Ensifer adhaerens OV14 provides insights into its ability as a novel vector for the genetic transformation of plant genomes

Gene id eggNOG OV14 gene C58 gene 1021 gene No. species No. protein Virulence function Product
In C58   Copy number Copy number Copy number In NOG In NOG In C58  
celD aproNOG11524 0 1 0 7 7 Attachment Cellulose biosynthesis protein
celE aproNOG04598 1 1 0 7 7 Attachment Cellulose synthesis protein
celG aproNOG12411 1 1 0 23 26 Attachment Cellulose synthesis protein
celC aproNOG07630 1 1 0 25 28 Attachment Endoglucanase
celB aproNOG09454 1 1 0 23 26 Attachment Cellulose synthase
celA aproNOG05761 1 1 0 27 30 Attachment Cellulose synthase
attK2 aproNOG02908 0 1 1 17 18 Attachment Semialdehyde dehydrogenase
attA1 aproNOG00407 3 2 4 47 73 Attachment ABC transporter, nucleotide binding/ATPase protein [putrescine]
attA2 aproNOG05011 0 1 1 15 15 Attachment ABC transporter, membrane spanning protein [mannopine]
attB aproNOG06835 0 1 1 16 16 Attachment ABC transporter, membrane spanning protein [mannopine]
attC aproNOG06683 0 1 1 12 12 Attachment ABC transporter, substrate binding protein [mannopine]
attE aproNOG05033 0 2 0 24 25 Attachment ABC transporter nucleotide binding/ATPase protein
attF aproNOG00433 0 3 0 24 26 Attachment ABC transporter, membrane spanning protein
attG aproNOG00433 0 3 0 24 26 Attachment ABC transporter, membrane spanning protein
attH aproNOG04763 0 2 0 22 23 Attachment Hypothetical protein
attJ/blcR aproNOG06067 0 1 0 17 17 Attachment Transcriptional repressor of the blcABC operon
attK/blcA aproNOG00713 4 3 5 88 141 Attachment NAD-dependent succinyl-semialdehyde dehydrogenase
attL/blcB aproNOG04363 0 1 1 15 19 Attachment Gamma hydroxybutyrate dehydrogenase
attM/blcC aproNOG02812 0 2 0 19 23 Attachment Zn-dependent gamma butyryl lactone lactonase
attO aproNOG09383 0 1 0 5 5 Attachment Transcriptional regulator, AraC family
attR aproNOG01724 0 2 1 24 27 Attachment Transacetylase
attT aproNOG12782 0 1 0 3 3 Attachment GNAT family acetyltransferase
attV aproNOG09482 0 1 0 12 12 Attachment Mg (2+) transport ATPase
attY aproNOG07710 0 1 0 45 48 Attachment Glutathione S-transferase
attZ aproNOG08980 0 1 0 21 26 Attachment Transcriptional regulator
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BMC Genomics

ISSN: 1471-2164

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