Skip to main content

Table 4 Soybean lipid biosynthesis related genes (WRI1 network genes)

From: SFGD: a comprehensive platform for mining functional information from soybean transcriptome data and its use in identifying acyl-lipid metabolism pathways

Gene

Probe set(s)

Homolog

Annotation

Glyma06g11860

GmaAffx.50807.1.S1_at, GmaAffx.50807.2.S1_at, GmaAffx.26813.1.A1_at

AT1G77590

LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9); long-chain-fatty-acid-CoA ligase

Glyma18g50020

Gma.16819.1.S1_at

AT5G16390

CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase/biotin binding

Glyma07g37050

GmaAffx.84778.1.S1_at

AT3G16950

LPD1 (LIPOAMIDE DEHYDROGENASE 1); dihydrolipoyl dehydrogenase

Glyma08g22750

GmaAffx.47472.1.S1_at

AT3G15820

Phosphatidic acid phosphatase-related/PAP2-related

Glyma03g39860

Gma.959.1.S1_at

AT1G54860

Unknown protein

Glyma04g14830

GmaAffx.86095.1.S1_at

AT1G65870

Disease resistance-responsive family protein

Glyma18g01280

Gma.910.1.A1_at

AT1G24360

3-oxoacyl-(acyl-carrier protein) reductase, chloroplast/3-ketoacyl-acyl carrier protein reductase

Glyma05g36450

Gma.8414.1.S1_at, Gma.8414.1.S1_s_at

AT5G35360

CAC2; acetyl-CoA carboxylase/ biotin carboxylase

Glyma12g11150

GmaAffx.3734.1.S1_at

AT5G05410

DREB2A; DNA binding/transcription activator/ transcription factor

Glyma16g27460

GmaAffx.25251.1.S1_at

AT2G39210

nodulin family protein

Glyma01g21480

GmaAffx.85056.2.S1_at, Gma.14628.1.S1_at

AT1G25510

aspartyl protease family protein

Glyma15g35080

Gma.12634.1.A1_s_at

AT3G56850

AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding/transcription activator/transcription factor

Glyma12g34740

Gma.11970.1.S1_at

AT5G54250

ATCNGC4 (CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4); calmodulin binding/cation channel/cation transmembrane transporter/cyclic nucleotide binding

Glyma15g00450

Gma.12064.1.S1_at

AT5G25900

GA3 (GA REQUIRING 3); ent-kaurene oxidase/oxygen binding

Glyma03g34760

GmaAffx.93571.1.S1_s_at, GmaAffx.93571.1.S1_at, GmaAffx.73653.1.S1_at

AT3G52970

CYP76G1; electron carrier/heme binding/iron ion binding/monooxygenase/oxygen binding

Glyma01g36180

Gma.3792.1.A1_at

AT1G42960

unknown protein

Glyma10g31540

Gma.17374.1.S1_at, GmaAffx.64124.1.S1_at, GmaAffx.87290.1.S1_at

AT1G32900

starch synthase, putative

Glyma04g27740

GmaAffx.25768.1.S1_at

AT1G65870

disease resistance-responsive family protein

Glyma08g03120

Gma.181.1.S1_at

AT5G35360

CAC2; acetyl-CoA carboxylase/ biotin carboxylase

Glyma05g03210

Gma.8701.1.S1_at, GmaAffx.7258.1.S1_s_at

AT4G24830

arginosuccinate synthase family

Glyma18g43140

Gma.2316.1.S1_at

AT5G05600

oxidoreductase, 2OG-Fe(II) oxygenase family protein

Glyma07g13560

GmaAffx.5167.1.S1_at

AT4G01070

GT72B1; UDP-glucosyltransferase/UDP-glycosyltransferase/transferase, transferring glycosyl groups

Glyma09g38570

GmaAffx.81233.1.A1_at

AT5G16460

Unknown protein

Glyma10g12290

Gma.1883.1.S1_at

AT2G41190

Amino acid transporter family protein

Glyma08g36590

Gma.14186.1.A1_at

AT5G46690

bHLH071 (beta HLH protein 71); DNA binding/transcription factor

Glyma13g44870

GmaAffx.59734.1.A1_at, GmaAffx.86023.1.S1_at, GmaAffx.33541.1.S1_at

AT5G25900

GA3 (GA REQUIRING 3); ent-kaurene oxidase/oxygen binding

Glyma03g20380

GmaAffx.37979.1.S1_at

AT3G07250

Nuclear transport factor 2 (NTF2) family protein/RNA recognition motif (RRM)-containing protein

Glyma05g31820

GmaAffx.29450.1.S1_at

AT1G10500

ATCPISCA (chloroplast-localized IscA-like protein); structural molecule

Glyma17g00580

Gma.10258.1.A1_s_at, Gma.10258.2.S1_at, GmaAffx.83788.1.S1_at

AT5G49820

emb1879 (embryo defective 1879)

Glyma07g03350

Gma.11469.1.S1_at, GmaAffx.67403.1.S1_at, GmaAffx.67403.1.A1_at

AT3G15820

phosphatidic acid phosphatase-related/PAP2-related

Glyma18g44350

Gma.6041.1.S1_at

AT1G62640

KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III); 3-oxoacyl-[acyl-carrier-protein] synthase/catalytic/transferase, transferring acyl groups other than amino-acyl groups