Skip to main content

Table 1 Genes in the Streptococcus bovis / Streptococcus equinus complex potentially involved in adaptation to the rumen

From: Comparative genomics of the dairy isolate Streptococcus macedonicus ACA-DC 198 against related members of the Streptococcus bovis/Streptococcus equinus complex

Function

Gene

S. gallolyticus UCN34

S. gallolyticus ATCC 43143

S. gallolyticus ATCC BAA-2069

S. pasteurianus ATCC 43144

S. macedonicus ACA-DC 198

S. infantarius CJ18

Pullulanase

- (a)

GALLO_1462

SGGB_1458

SGGBAA2069_c14850

SGPB_1362 (t)

SMA_1464 (s)

Sinf_1270

      

SMA_1465 (s)

 

Pullulanase

-

GALLO_0781

SGGB_0764

SGGBAA2069_c07530

-

SMA_0719 (p)

-

      

SMA_0720 (r)

 
      

SMA_0721 (p)

 

α-amylase, neopullulanase

-

GALLO_0753

SGGB_0736

SGGBAA2069_c07260

-

-

-

Fructan hydrolase

fruA

GALLO_0112

SGGB_0110

SGGBAA2069_c01280

-

-

-

Beta-1,4-endoglucanase V (cellulase)

-

GALLO_0330

SGGB_0358

SGGBAA2069_c03180

-

-

-

Cinnamoyl ester hydrolase

cinA

GALLO_0140

SGGB_0137

SGGBAA2069_c01580

-

-

-

Mannanase

-

GALLO_0162

SGGB_0206

SGGBAA2069_c01800

-

-

Sinf_0174 (p)

Endo-beta-1,4-galactanase

-

GALLO_0189

SGGB_0233

SGGBAA2069_c02070

SGPB_0176

SMA_0214 (p)

Sinf_0197 (p)

Pectate lyase

-

GALLO_1577

SGGB_1576

SGGBAA2069_c16050

-

-

Sinf_1418

Pectate lyase

-

GALLO_1578

SGGB_1577

SGGBAA2069_c16060

SGPB_1461 (p)

SMA_1582 (p)

-

      

SMA_1583 (s)

 
      

SMA_1584 (s)

 

Malate transporter

mleP

GALLO_2048

SGGB_2031

SGGBAA2069_c20060

SGPB_1855

SMA_1945

Sinf_1750

Malate dehydrogenase

mleS

GALLO_2049

SGGB_2032

SGGBAA2069_c20070

SGPB_1856

SMA_1946

Sinf_1751

PTS system, mannitol-specific IIBC component

mtlA

GALLO_0993

SGGB_0982

SGGBAA2069_c09680

-

SMA_0905 (p)

-

Mannitol operon transcriptional antiterminator

mtlR

GALLO_0994

SGGB_0983

SGGBAA2069_c09690

-

SMA_0906 (p)

-

      

SMA_0907

 
      

SMA_0908

 
      

SMA_0909

 
      

SMA_0910

 
      

SMA_0911

 
      

SMA_0912

 
      

SMA_0913

 
      

SMA_0914

 
      

SMA_0915

 
      

SMA_0916

 
      

SMA_0917

 

PTS system, mannitol-specific IIA component

mtlF

GALLO_0995

SGGB_0984

SGGBAA2069_c09700

-

-

-

Mannitol-1-phosphate 5-dehydrogenase

mtlD

GALLO_0996

SGGB_0985

SGGBAA2069_c09710

-

-

-

α-amylase

-

GALLO_0757

SGGB_0740

SGGBAA2069_c07300

-

-

-

α-amylase

amyE

GALLO_1632

SGGB_1646

SGGBAA2069_c16600

SGPB_1505 (p)

SMA_1612 (t)

Sinf_1443

α-amylase

-

GALLO_1043

SGGB_1033

SGGBAA2069_c10200

SGPB_0905

SMA_0972

Sinf_0846

tannase

tanA

GALLO_0933

SGGB_0917

SGGBAA2069_c09070 (s)

-

-

-

    

SGGBAA2069_c09080 (s)

   

Tannase (similar to tanA)

-

GALLO_1609

SGGB_1624

SGGBAA2069_c16370

-

-

-

Phenolic acid decarboxylase

padC

GALLO_2106

SGGB_2089

SGGBAA2069_c21040

SGPB_1899

SMA_2074

-

Carboxymuconolactone decarboxylase

-

GALLO_0906

SGGB_0891

SGGBAA2069_c08850

SGPB_0775

-

-

Bile salt hydrolase

bsh

GALLO_0818

SGGB_0803

SGGBAA2069_c07920

SGPB_0678

SMA_0753 (p)

Sinf_0639

  1. (a) Not found; (t) Truncated; (s) Split CDSs corresponding to fragments of the original gene not yet characterized as pseudogenes; (p) Pseudogenes; (r) Transposase genes in italics.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us