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Table 1 SNPs derived by comparing 5M g S sequences based on reads mapped on the 5AS, 5BS and 5DS reference sequence assemblies from the IWGSC

From: SNP Discovery for mapping alien introgressions in wheat

Reference assemblies Mapped reads Raw SNPs Filtered SNPs Genic SNPs
5AS 45,989,152 976,754 277,770 35,749
5BS 35,168,202 675,007 203,522 31,526
5DS 38,012,773 851,722 355,765 11,704