| |
n
|
T
|
% pol
|
SNP
|
Private
|
P
|
H
O
|
H
E
|
F
IS
|
π
|
N
e
|
|---|
|
Br
|
17
|
24273
|
23.64
|
8755
|
2511
|
0.800
|
0.265
|
0.282
|
0.079
|
0.0014
|
23083
|
|
Au
|
17
|
25019
|
21.68
|
8026
|
1310
|
0.810
|
0.234
|
0.268
|
0.120
|
0.0012
|
19479
|
|
In
|
13
|
25002
|
20.87
|
7757
|
1423
|
0.809
|
0.253
|
0.270
|
0.083
|
0.0012
|
19230
|
|
Vi
|
15
|
22333
|
20.61
|
6877
|
1200
|
0.815
|
0.243
|
0.261
|
0.079
|
0.0011
|
18401
|
|
All
|
62
|
13591
|
70.72
|
18147
| | | | | | | |
- n - the number of analyzed individuals from Brazil (Br), Australia (Au), Indonesia (In) and Vietnam (Vi); T - the number of RAD loci; % pol - percentage of polymorphic loci; SNP - total number of SNPs; private - the number of private SNPs; P - average frequency of the more common allele; HO, HE – observed and expected heterozygosity at polymorphic sites; FIS - fixation index across polymorphic sites; π – average nucleotide diversity (calculated across polymorphic and non-variant sites); Ne – lower range effective population size (for μ = 10-8 per site per generation).
