Soybean line | Jack | FAM94-41 | M23 | N0304-303-3 | R02-6268Â F | R05-4256 | R05-591 | R08-1450 | R95-1705 | Total | Average |
---|---|---|---|---|---|---|---|---|---|---|---|
Total SNP count in annotated genes | 414 | 668 | 615 | 618 | 633 | 427 | 467 | 722 | 578 | 1186 | 571.33 |
SNPs in annotated exons | 379 | 585 | 550 | 548 | 553 | 392 | 413 | 625 | 501 | 1012 | 505.11 |
SNPs in annotated UTRs | 112 | 188 | 162 | 164 | 177 | 127 | 142 | 192 | 168 | 304 | 159.11 |
SNPs in annotated CDS | 267 | 397 | 388 | 384 | 376 | 265 | 271 | 433 | 333 | 708 | 346.00 |
Non-synonymous SNPs | 111 | 157 | 156 | 149 | 155 | 100 | 99 | 172 | 146 | 280 | 138.33 |
Synonymous SNPs | 156 | 240 | 232 | 235 | 221 | 165 | 172 | 261 | 187 | 428 | 207.67 |
SNPs eliminating start codons | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.20 |
SNPs causing premature termination codons | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0.89 |
SNPs eliminating termination codons | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00 |
SNPs in splice sites | 1 | 3 | 2 | 2 | 3 | 1 | 0 | 2 | 2 | 5 | 1.78 |
SNPs in annotated introns | 56 | 114 | 88 | 96 | 98 | 58 | 81 | 126 | 103 | 174 | 91.11 |
SNPs overlapping with dbSNP | 355 | 552 | 524 | 514 | 545 | 363 | 393 | 614 | 489 | 998 | 483.22 |