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Table 4 Evaluation of SNP array in all samples

From: Development and evaluation of the first high-throughput SNP array for common carp (Cyprinus carpio)

Category C. carpio Related species of C. carpio
  Percentage (%) SNP count Probe count Percentage (%) SNP count Probe count
Poly high resolution 74.06 185,150 220,615 21.65 54,116 60,143
No minor homology 1.68 4,202 7,173 2.70 6,748 8,772
Mono high resolution 0.07 180 315 0.04 88 126
Call rate below threshold 13.50 33,742 58,146 9.59 23,981 32,564
Off Target Variation (OTV) 1.15 3,610 3,610 4.38 10,941 20,424
Other 9.54 23,844 26,734 61.65 154,126 194,564
Total 100.00 250,000 316,593 100 250,000 316,593
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